Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_1911 |
Symbol | lpxD |
ID | 6176992 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | - |
Start bp | 2125529 |
End bp | 2126638 |
Gene Length | 1110 bp |
Protein Length | 369 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641681670 |
Product | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
Protein accession | YP_001808609 |
Protein GI | 172060957 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1044] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
TIGRFAM ID | [TIGR01853] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.642798 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCATTGA CGCTCGAGGA ACTCGTAAAG CGGTTCGGCG GCGAGATCGC CGGCGACGCC CAGTGCAAGG TGAGCGGCCT CGCGCCGCTC GACCAGGCAG GCCCTCAGCA ACTCGCGTTT CTCGCGAATC CGAAGTACCT GTCGCAGGTC GAGACGACCC GCGCCGGCGC GGTGCTGATC GCGCCGAAGG ATCTCGAAAA GCTGCGCGCG GCTACTGACG GCCAGCCGGC CGGCCCCCGG ATGGCCGGCC CCCTCAATTT CATCGTGACG CCGAATCCGT ACGCGTATTT CGCGCGCGTC GCGCAGATGT TCATCGATCT CGCCACGCCA CCGCGCGCGC CGGGCGTGCA TCCGAGCGCG ACGATCGATC CGGCCGCCCA GGTTGCCGCG AGCGCGGTGA TCGGCCCGCA CGTGACGGTC GAGGCCGGCG CGGTGATCGA GGACGGCGTG CAGCTCGACG CGAACGTGTT CATCGGCCGC GGCACGACGA TCGGCGCGGG TTCGCACCTG TATCCGAACG CATCGGTGTA CCACGGCTGC AAGATCGGCC CGCGCGCGAT CATCCATGCG GGTGCCGTGA TCGGATCCGA CGGGTTCGGC TTCGCGCCGG ATTTCGTCGG CGACGGCGAT GCGCGCACCG GCAGCTGGGT CAAGATCCCG CAGGTCGGCG GCGTGACGGT CGGCCCGGAT GTCGAGATCG GCGCGAACAC GACGATCGAC CGCGGCGCGA TGGCGGACAC CGTCATCGAC GAATGCGTGA AGATCGACAA TCAGGTTCAG ATCGGCCACA ACTGCCGGAT CGGTGCCTAC ACGGTGATCG CGGGCAGCGC CGGCATCGCC GGCAGCACGA CGATCGGCCG CCACTGCATG ATCGGCGGCG CAGCAGGCAT CGCCGGCCAC GTGACGCTCG GCGACTATGT CATCATCACC GCGAAGTCGG GCGTGTCGAA GTCGCTGCCG AAGGCCGGCA TCTACACGAG CGCATTCCCG GCCGTCGACC ACGGCGAATG GAACCGGAGC GCCGCGCTCG TGCGCAACCT CGACAAGCTG CGCGAGCGTA TCAAGGCGCT CGAAACCGCA CTGGCCGCCC AGGGCGGCAC GGACGCCTGA
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Protein sequence | MALTLEELVK RFGGEIAGDA QCKVSGLAPL DQAGPQQLAF LANPKYLSQV ETTRAGAVLI APKDLEKLRA ATDGQPAGPR MAGPLNFIVT PNPYAYFARV AQMFIDLATP PRAPGVHPSA TIDPAAQVAA SAVIGPHVTV EAGAVIEDGV QLDANVFIGR GTTIGAGSHL YPNASVYHGC KIGPRAIIHA GAVIGSDGFG FAPDFVGDGD ARTGSWVKIP QVGGVTVGPD VEIGANTTID RGAMADTVID ECVKIDNQVQ IGHNCRIGAY TVIAGSAGIA GSTTIGRHCM IGGAAGIAGH VTLGDYVIIT AKSGVSKSLP KAGIYTSAFP AVDHGEWNRS AALVRNLDKL RERIKALETA LAAQGGTDA
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