Gene BamMC406_1901 details

Gene Information

• Locus tag: BamMC406_1901
• Symbol: smpB
• ID: 6176904
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia ambifaria MC40-6
• Kingdom: Bacteria
• Replicon accession: NC_010551
• Strand: +
• Start bp: 2115226
• End bp: 2115672
• Gene Length: 447 bp
• Protein Length: 148 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 641681660
• Product: SsrA-binding protein
• Protein accession: YP_001808599
• Protein GI: 172060947
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0691] tmRNA-binding protein
• TIGRFAM ID: [TIGR00086] SsrA-binding protein

Plasmid Coverage information

• Num covering plasmid clones: 25
• Plasmid unclonability p-value: 0.673502
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 28
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAGCATCA TCGACAACAG GAAAGCGCAC TTCGATTATC ACATCGAGGA ACGCTACGAG 
GCGGGGCTCG TGCTGGAGGG CTGGGAAGTC AAGGCGCTGC GCGCCGGGCG CGGCCAGATC 
AAGGAAGGCT ACGTCGTCGT CAAGAACGCC GAGATCTTCC TCATCGGCAC CCACATCAGC 
CCGCTGCCAG AAGCCTCGAC GCACATCCAC CCCGATCCGG TCCGCACGCG CAAGCTGCTG 
CTGCACCGCG ACGAAATCAA GAAACTGATC GGCAAGGTCG AGCAGCGCGG CTACACGCTC 
GTGCCGCTGA ACTTCCACTA CAAGGGCGGT CGCGTGAAAT GCGACATCGC GCTCGCGAAG 
GGCAAGAAGC TGCACGACAA GCGCGAAACC GAGAAGAAGC GCGATTGGGA ACGCGAAAAA 
GCCCGCATCA TGCGCGCCGG TACCTGA 

 

Protein sequence

MSIIDNRKAH FDYHIEERYE AGLVLEGWEV KALRAGRGQI KEGYVVVKNA EIFLIGTHIS 
PLPEASTHIH PDPVRTRKLL LHRDEIKKLI GKVEQRGYTL VPLNFHYKGG RVKCDIALAK 
GKKLHDKRET EKKRDWEREK ARIMRAGT