Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_1887 |
Symbol | |
ID | 6176815 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 2101873 |
End bp | 2103612 |
Gene Length | 1740 bp |
Protein Length | 579 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641681646 |
Product | putative oxidoreductase |
Protein accession | YP_001808585 |
Protein GI | 172060933 |
COG category | [C] Energy production and conversion |
COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.217811 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.846517 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATACCC ATGTACTCGA ATACGACATC GTCGTGGTCG GCGGCGGCAC GGCCGGCCCG ATGGCTGCGA TCAAGGCCAA GGAGCGCGAC CCGTCGCTGC GCGTGCTGCT GCTGGAGAAG GCCAACGTGA AACGCAGCGG CGCGATCTCG ATGGGGATGG ACGGCCTGAA CAACGCGGTG ATCCCCGGCC ATGCGACGCC CGAGCAGTAC ACGCGCGAGA TCACGATCGC CAACGACGGG ATCGTCGACC AGGAAGCCGT CTACGCATAT GCGACGCACA GCTTCGCGAC AATCGAGCAG CTCGACCGCT GGGGCGTGAA GTTCGAAAAG GACGGCACCG GCGACTACGC GGTGAAGAAG GTGCACCACA TGGGTTCGTA CGTGCTGCCG ATGCCGGAAG GACACGACAT CAAGAAGGTG CTGTACCGGC AGCTGAAGCG CGCGCGCATC GCGATCACGA ACCGGATCGT CGCGACGCGC GTGCTGACCG ACGCGCAGGG CCGCGCGAGC GGCGTGCTCG GCTTCGACTG CCGCACCGCC GATTTTCACG TGATCCGCGC GAAGGCCGTG ATCCTGTGCT GCGGCGCGGC CGGCCGTCTC GGGCTGCCGG CGTCCGGCTA CCTGATGGGC ACGTACGAGA ACCCGACCAA CGCGGGCGAC GGCTACGCGA TGGCGTACCA CGCGGGCGCG GCGCTCGCGA ACCTCGAGTG CTTCCAGATC AACCCGCTGA TCAAGGACTA CAACGGCCCG GCCTGCGCGT ACGTGACGGG CCCGCTCGGC GGCTTCACCG CGAACGGCAA GGGCGAGCGC TTCATCGAGT GCGACTACTG GAGCGGCCAG ATGATGTGGG AGTTCTACCA GGAACTGCAA AGCGGCAACG GTCCGGTGTT CCTGAAGCTC GACCACCTCG CCGAGGAAAC GATCCAGACC ATCGAGCAGA TCCTGCACAC GAACGAGCGG CCGAGCCGCG GCCGCTTCCA TGCGGGACGC GGCACCGACT ACCGGCGCCA GATGGTCGAG ATGCACATCT CCGAGATCGG TTTGTGCAGC GGCCACAGCG CGTCCGGCGT GTATGTGAAC GCGCGCGCGG AAACGACCGT GCCGGGGCTC TACGCGGCCG GCGACATGGC GGCCGTCCCG CACAACTACA TGCTCGGCGC GTTCACCTAC GGCTGGTTCG CCGGGCAGAA CGCCGCCGAC TACGTGGCCG GCCGCGATCA CGCGCCGGTG GACGACGAAC AGGTCGCCGC CGAACGCACC CGCGTGCTCG CGCCGCTCAC GCGCGAGCGC GGCCTCGCGC CGGCGCAGGT CGAATACAAG CTGCGCCGCA TGGTGAACGA CTATCTTCAA CCACCGAAGG TGACGCGCAA GATGGAAATC GGCTTGCAAC GCTTTGACGG AATTACTGAG GATATCGAAG AAATCAAGGC GAATCACCCG CATGAACTGA TGCGCGCGGC CGAAGTGCGC GCGATCCGCG ACTGCGCCGA GATGGCCGCG CGGGCGTCGC TGTTTCGCAC CGAGAGCCGC TGGGGACTGT ATCACCATCG CGTCGACTTC CCGCATCGCA ACGACGCCGA GTGGTTCTGC CACACCTGGC TGCGCAAAGG CGTCGACGGC ACGATGCGCA GCGAGAAGCG GCCGGTCGAA CCCTACGTCG TGCCGCTCGC CGACGACGAA CGCAGTGCGT ACGCGCAGTT GCGCATCCGC GAACCGGCCG CACACGCGGC CGCCCTTTGA
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Protein sequence | MNTHVLEYDI VVVGGGTAGP MAAIKAKERD PSLRVLLLEK ANVKRSGAIS MGMDGLNNAV IPGHATPEQY TREITIANDG IVDQEAVYAY ATHSFATIEQ LDRWGVKFEK DGTGDYAVKK VHHMGSYVLP MPEGHDIKKV LYRQLKRARI AITNRIVATR VLTDAQGRAS GVLGFDCRTA DFHVIRAKAV ILCCGAAGRL GLPASGYLMG TYENPTNAGD GYAMAYHAGA ALANLECFQI NPLIKDYNGP ACAYVTGPLG GFTANGKGER FIECDYWSGQ MMWEFYQELQ SGNGPVFLKL DHLAEETIQT IEQILHTNER PSRGRFHAGR GTDYRRQMVE MHISEIGLCS GHSASGVYVN ARAETTVPGL YAAGDMAAVP HNYMLGAFTY GWFAGQNAAD YVAGRDHAPV DDEQVAAERT RVLAPLTRER GLAPAQVEYK LRRMVNDYLQ PPKVTRKMEI GLQRFDGITE DIEEIKANHP HELMRAAEVR AIRDCAEMAA RASLFRTESR WGLYHHRVDF PHRNDAEWFC HTWLRKGVDG TMRSEKRPVE PYVVPLADDE RSAYAQLRIR EPAAHAAAL
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