Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_1881 |
Symbol | |
ID | 6178515 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | - |
Start bp | 2096245 |
End bp | 2096949 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641681640 |
Product | GntR family transcriptional regulator |
Protein accession | YP_001808579 |
Protein GI | 172060927 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.249163 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGATCA TGAACGAGCC CGATTCCCAT GCGTCCGGTA CAGCCGGCCC CGAAGCGATC GCCGAGCGGA TCCGCACCGC GATCCTCGAG CATCGGCTCG CGCCCGGCGC GAAGCTGACG GAGGCGCAGC TCTGCGACGT GTTCGGCGTG AAGCGCGGGA CGATCCGGCA GGCGCTCGCG CTGCTCGCCG CCGACAAGCT GGTCGATCTC GAGCCGAACC GCGGCGCGTT CGTCGCGAGT CCGACGCTGC AGGACGTGCA CGAGGTGTTC GAGATGCGCC GGATCATCGA GCTGGCCGTC GTCGAGCGGC TCGCGACGGG GCCGGGCGCG AAGCGGTTGA AGGGCGTCGC CGCGCTGATC GACAAGGAAC GCAAGGCGTT CGAGCGGCAC GATTTCGCGG CGTGGATCCG CCTGTCGGGC GAATTCCATA CGGCGCTCGC GGCGCTGACG GGCAATGCGA CGCTCTGCGA GTGCCTCGAC GGGCTCGTCG CACGCTCGAC GCTGATGTCG GCGCTGTACG AATCGCACGG GCGCAGCCCG TGCTCGTGCG ATGACCACGA CGAGATCCTG AGCGCGCTGG AAGCGGGGGA TCCGAAGCGG GCGGTGACGC TGATGGCGCA CCACCTGCAG CATGTCGAAC TGAAGATGCT GGACCGGCCC GCGCAAGGGC AGGTCGATTT GCGCGAAGTG TTCGGCGGCG CCTGA
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Protein sequence | MQIMNEPDSH ASGTAGPEAI AERIRTAILE HRLAPGAKLT EAQLCDVFGV KRGTIRQALA LLAADKLVDL EPNRGAFVAS PTLQDVHEVF EMRRIIELAV VERLATGPGA KRLKGVAALI DKERKAFERH DFAAWIRLSG EFHTALAALT GNATLCECLD GLVARSTLMS ALYESHGRSP CSCDDHDEIL SALEAGDPKR AVTLMAHHLQ HVELKMLDRP AQGQVDLREV FGGA
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