| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1870 |
|---|
| Symbol | |
|---|
| ID | 6178204 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010551 |
|---|
| Strand | - |
|---|
| Start bp | 2086364 |
|---|
| End bp | 2087776 |
|---|
| Gene Length | 1413 bp |
|---|
| Protein Length | 470 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641681629 |
|---|
| Product | hydroxydechloroatrazine ethylaminohydrolase |
|---|
| Protein accession | YP_001808568 |
|---|
| Protein GI | 172060916 |
|---|
| COG category | [F] Nucleotide transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0402] Cytosine deaminase and related metal-dependent hydrolases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.0172647 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCTCG AGCAGCACGC CGGCGCACGC GCGCCACAAC CATCCTCATC CCGCCCGAAA
ACCCTGCTGG TCAAGCACGC CGACGTGCTC GTGACCATGG ACGACACGCG GCGCGAACTG
CGCGACGCGG GGCTCTATAT CGAAGACAAC CGGATCGTCG CGGTCGGCCC TAGCGCCGAG
CTGCCCGATA GCGCCGACGA AGTGCTCGAC CTGCGTGGCC ACCTGGTGAT CCCGGGGCTC
GTGAACACGC ACCATCACAT GTACCAGAGC CTCACGCGCG CGGTGCCGGC CGCGCAGAAT
GCCGAGCTGT TCGGCTGGCT CACGAACCTG TACCGGATCT GGGCGCACCT GACGCCCGAG
ATGATCGAGG TGTCGACGCT GACCGCGATG GCCGAGCTGC TGCAGTCGGG CTGCACGACG
TCGAGCGATC ACCTGTACAT CTATCCGAAC GGCAGCCGGC TCGACGACAG CATCGGCGCC
GCGCACCGGA TCGGCATGCG GTTTCACGCG AGCCGCGGCG CGATGAGCGT CGGCCAGCGC
GACGGCGGGC TGCCGCCCGA CTCGGTCGTC GAGCGCGAGC CCGACATCCT GCGCGACGCG
CAGCGCCTGA TCGAGACCTA TCACGACGAA GGCCGCTACG CGATGCTGCG CGTGGTCGTC
GCGCCGTGCT CGCCGTTCTC GGTGAGCCGC GGCCTGATGC GCGACGCGGC CGTGCTGGCC
CGCGACTACG GCGTGTCGTT GCACACGCAC CTGGCCGAGA ACGTCAACGA CATCGCGTAC
AGCCGCGAGA AGTTCGGGAT GACGCCCGCC GAATACGCGG AAGATCTCGG CTGGGTCGGC
CACGACGTGT GGCACGCGCA CTGCGTGCAG CTCGACGATG CGGGCATCGG CCTGTTCGCG
CGCACCGGTA CGGGCGTCGC GCACTGTCCG TGTTCGAACA TGCGGCTCGC GTCGGGCATC
GCGCCGGTGA AGAAGATGCG TCTCGCGGGC GTGCCGGTCG GGATCGGCGT CGACGGTTCC
GCATCGAACG ACGGCGCGCA GATGGTCGCG GAAGTGCGGC AGGCGCTGCT GCTGCAGCGG
GTCGGCTTCG GGCCCGATGC GATGACCGCG CGGGAAGCGC TCGAGATCGC GACGCTCGGT
GGCGCGAAGG TGCTGAACCG CGACGATATC GGCGCGCTGA AGCCCGGCAT GGCCGCGGAC
TTCGCCGCGT TCGACCTGCG CCAGCCGCTG TTCGCGGGCG CGCTGCACGA TCCGGTCGCG
GCGCTCGTGT TCTGCGCGCC GTCGCAGACG GCGTACACGG TGGTGAACGG GAAGGTGGTG
GTGCGGGAAG GGCGGCTCGC GACGCTCGAC CTGCCGCCCG TCATCGAGCG CCACAACGCC
CTGGCGCACG CCCTCGTGGA GGCGTCGCGC TGA
|
|---|
| Protein sequence | MNLEQHAGAR APQPSSSRPK TLLVKHADVL VTMDDTRREL RDAGLYIEDN RIVAVGPSAE
LPDSADEVLD LRGHLVIPGL VNTHHHMYQS LTRAVPAAQN AELFGWLTNL YRIWAHLTPE
MIEVSTLTAM AELLQSGCTT SSDHLYIYPN GSRLDDSIGA AHRIGMRFHA SRGAMSVGQR
DGGLPPDSVV EREPDILRDA QRLIETYHDE GRYAMLRVVV APCSPFSVSR GLMRDAAVLA
RDYGVSLHTH LAENVNDIAY SREKFGMTPA EYAEDLGWVG HDVWHAHCVQ LDDAGIGLFA
RTGTGVAHCP CSNMRLASGI APVKKMRLAG VPVGIGVDGS ASNDGAQMVA EVRQALLLQR
VGFGPDAMTA REALEIATLG GAKVLNRDDI GALKPGMAAD FAAFDLRQPL FAGALHDPVA
ALVFCAPSQT AYTVVNGKVV VREGRLATLD LPPVIERHNA LAHALVEASR
|
|---|
| |