Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_1854 |
Symbol | |
ID | 6176933 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 2067123 |
End bp | 2068484 |
Gene Length | 1362 bp |
Protein Length | 453 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641681613 |
Product | integral membrane sensor signal transduction histidine kinase |
Protein accession | YP_001808552 |
Protein GI | 172060900 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000108072 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00000487933 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCGTATCG ACCGGCGCCT CCTGCAGCTC GCGTTCGGCG GGCTGTTCTG GCGCACCTTC CTGCTGATCG CGCTGCTGAT CTCGGTCAGT CTCGCCGCGT GGTTCCAGAG CTTTCGCGTG ATCGAGCGCG AGCCGCGCGC GCAGCGCGTC GCGCTCCAGC TCGTCGCGAT CGTGAAGCTC ACGCGCACCG CCCTGCTCTA TTCCGATCCC GATTTGCGGC GCGCGCTGCT GCAGGATCTC GAGAGCAACG AGGGCGTGCG CGTCTACCCG CGCGAAAAAA CCGACAAGTT CAAGCTGCAG CCCGACGAAT CGCTGAACCG TCTGATCGAA CACGATATCC GCAGCCGGCT CGGCGACGAG ACCGTGATCG CGCAGTCGGT CAACGACATT CCCGGCGTGT GGATCAGCTT CAAGATCGAC GACGACGACT ACTGGGTCGC GCTCGACCGC GACCAGCTCG ACAGCGTCAC GGGCCTGCAG TGGGCGGGCT GGGGCCTGTT CGCGCTCGCG TTGTCGCTGT TCGGCTCCGC GTTCATCACG AGCCTCGTGA ACCGGCCGTT CTCGCGCCTC GCGCTCGCCG CGCGCCAGAT CGGCTCGGGC CAGACGCCCG AGCTGCTGCC CGAGCGCGGG ATGGGCGTCG CGGCCGAGAC CAACCGCAGC TTCAACCAGA TGGTGCGCGA CCTCGAACAG CTCGAGGCCG ATCGCGCGCT GATGCTCGCG GGCATCTCGC ACGACCTGCG CACGCCGCTC GCGCGGCTGC GGCTCGAGAC CGAGATGAGC CCGTCCGACC AGGCGACCAA GGATGCGATG GTCGACGACA TCGAGCAGAT GGACCGCATC ATCGCCGCCT TCATCGACTA CGCGCGCCCG TCCCAGCGCA AGCCGGAGCC GGTCGACCTG TCGTCGATCG CGCACGAAGT CGCCGCGCGC GTGTCGGGCG AGGACGGCGT CGAGATCCGC ACGCGGCTCG CGCCGAGCGC CGTGATCGAA GCCGACGAGA CCGACATGCG CCGCGTAATC GGCAACCTCG TCGAGAACGC GCGCAAATAC GGCCAGAGCC GGCAGGACGG CGTGTCGCGG ATCACGCTCG AGACGCGCGT GTCGCACGCG CGGGTCGAGC TGTCGGTGAG CGACGAAGGT CCCGGCATCC CCGAGGATCA ACTGCCGCTC GTGATGCGGC CGTTCTACCG CGTCGACACG GCGCGCACCA AGGCGGACGG CACAGGGCTC GGCATGGCGA TCGTGCTGCG CCTCGTCGGC CGCTATCGCG GCGCGCTGCG CCTGCGCAAC CGCAGCCCCG ACGCAGGCCT CGAAGTCACG CTCGAATTCC CCGGCGCCGG CAAGGCGCGT GCGACGGCGT GA
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Protein sequence | MRIDRRLLQL AFGGLFWRTF LLIALLISVS LAAWFQSFRV IEREPRAQRV ALQLVAIVKL TRTALLYSDP DLRRALLQDL ESNEGVRVYP REKTDKFKLQ PDESLNRLIE HDIRSRLGDE TVIAQSVNDI PGVWISFKID DDDYWVALDR DQLDSVTGLQ WAGWGLFALA LSLFGSAFIT SLVNRPFSRL ALAARQIGSG QTPELLPERG MGVAAETNRS FNQMVRDLEQ LEADRALMLA GISHDLRTPL ARLRLETEMS PSDQATKDAM VDDIEQMDRI IAAFIDYARP SQRKPEPVDL SSIAHEVAAR VSGEDGVEIR TRLAPSAVIE ADETDMRRVI GNLVENARKY GQSRQDGVSR ITLETRVSHA RVELSVSDEG PGIPEDQLPL VMRPFYRVDT ARTKADGTGL GMAIVLRLVG RYRGALRLRN RSPDAGLEVT LEFPGAGKAR ATA
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