| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1746 |
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| Symbol | |
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| ID | 6177274 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 1950994 |
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| End bp | 1952349 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641681505 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_001808447 |
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| Protein GI | 172060795 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.325105 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.141964 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCGCCG ACATCCGCCG GATCGTCGGT CTCGCGTGGC CGGTGCTCGT CGGCCAGCTC
GCGATCATCG CGTTCGGCGT GATCGATACG GCGATGGTCG GCCGCTACTC GGCCATCGAC
CTGGCCGCGC TCGGGCTCGG TTCGTCGATC TACGTGTCGA TCTACATCGG GATGACGGGC
ATCCTGTCCG CGCTGCAGCC GATCACCGGG CAGCTGTACG GCGCCCGCCG CTACGCCGAG
ATCGGCGAGG AAGTCCGCCA GGCGCTATGG CTCGCGCTGA TGCTGGCGGT GCCCGGCTTC
CTGCTGCTGC ATTTTCCCGA ACCGCTGCTG CACATCGCCC ACGCGCCGCC CGCGCTGCAC
GAGCGCACCG TCGATTACCT GCGCATCCTG TCGTACGGGC TGCCTGCGAG CCTCGTTTTC
CGGATCTACA ACGCGCTGAC CAACGCGGCC GGCAAGCCGC GCCTCGCGAT GATCCTGCAG
ATCGGCGCGC TGCTGCTCAA GTTTCCGCTC AACGTGTGGT TCATCTTCGG CGGGTTCGGC
GTGCCAGCCC TCGGCGGCCC CGGTTGCGGG CTCGCGAGCA CGCTGATCAA CTGGGCGCTC
GCGCTGGTCG GCTTCACGCT GCTCGCGAAG CTCGACGTGT TCACGCCGCT CGCGATCTTC
TCGCGCTTTT GCTGGCCCGT CTGGGCGCGC CAGAAGGCGA TCCTGAAGCT CGGCGTGCCG
ATGGGCCTGT CGTATCTGAT CGAGGTCACG TCGTTCACGT GCATGGCGCT CTTCATCGCA
CAGTTCGGTA CGACGACGCT CGCCGGCCAC CAGATCGCCG GCAACATCAG CGCGGTGCTG
TACATGACGC CGCTGTCGAT CGGCGTCGCG GCATCGACGC TCGTCGCGCG CGCACTCGGT
GCCGGCCGTC CGGACGAAGC GCGCCTGCTC GGCCGGCACA GCGTGATGCT CGCGTGCGGG
ATCGCGGCCG CGTATGGCGT GCTGGTGTTC ACGCTGCGTC CGCTGATCGT CAGCGGCTAT
ACGCCGAACC CGGCCGTGGT GGCCGCCGCG CTGCCGCTGG TCGCGATCGT CACCTGCTAT
CACTTCTTCG ATGCGCTGCA GATCACGTCG GCATTCGTGC TGCGCGCGTA CAAGGTCGCG
GTCGTGCCGA CCGTGATCTA CGCGGTCGCG CTGTGGGGCG TCGGGCTGGG CGGCGGCTAC
ATGCTCGGCT TCGACATCGG CGGCATCGCA CCGGCATGGC TGACCGGTGC GCGTGGCTTC
TGGTTCGCGA ACACGATCAG CCTGATGCTC GCCGGTGCGG GACTCGCCCT CTACCTGCGC
CGCGTCAGCC GCGCGGCGCT GTCCGTCGGC GCCTGA
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| Protein sequence | MFADIRRIVG LAWPVLVGQL AIIAFGVIDT AMVGRYSAID LAALGLGSSI YVSIYIGMTG
ILSALQPITG QLYGARRYAE IGEEVRQALW LALMLAVPGF LLLHFPEPLL HIAHAPPALH
ERTVDYLRIL SYGLPASLVF RIYNALTNAA GKPRLAMILQ IGALLLKFPL NVWFIFGGFG
VPALGGPGCG LASTLINWAL ALVGFTLLAK LDVFTPLAIF SRFCWPVWAR QKAILKLGVP
MGLSYLIEVT SFTCMALFIA QFGTTTLAGH QIAGNISAVL YMTPLSIGVA ASTLVARALG
AGRPDEARLL GRHSVMLACG IAAAYGVLVF TLRPLIVSGY TPNPAVVAAA LPLVAIVTCY
HFFDALQITS AFVLRAYKVA VVPTVIYAVA LWGVGLGGGY MLGFDIGGIA PAWLTGARGF
WFANTISLML AGAGLALYLR RVSRAALSVG A
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