| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1712 |
|---|
| Symbol | |
|---|
| ID | 6177339 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010551 |
|---|
| Strand | - |
|---|
| Start bp | 1914239 |
|---|
| End bp | 1915585 |
|---|
| Gene Length | 1347 bp |
|---|
| Protein Length | 448 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641681471 |
|---|
| Product | adenylosuccinate synthetase |
|---|
| Protein accession | YP_001808413 |
|---|
| Protein GI | 172060761 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0104] Adenylosuccinate synthase |
|---|
| TIGRFAM ID | [TIGR00184] adenylosuccinate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.12828 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.354425 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGCCA GCGCAGTGAA CGTGACTCCC GGGCGCAATG TCGTCGTCGT GGGAACGCAA
TGGGGTGATG AAGGCAAGGG CAAGATCGTC GACTGGCTGA CGGACCACGC TCAGGGCGTC
GTGCGTTTCC AGGGCGGTCA CAACGCCGGC CACACCCTCA TCATCGGCGG CAAGAAAACC
ATCTTGCGCC TCATTCCGTC GGGCATCATG CGTGAAGGCG TCGCCTGCTA CATCGGCAAC
GGCGTCGTCC TGTCCCCCGA GGCACTGTTC AAGGAAATCG GCGAGCTGGA AGAAGCCGGC
GTGAACGTTC GCGATCGCCT GTTCATTTCC GAAGCCACGA CGCTGATCCT GCCGTACCAC
ATCGCGATCG ACCAGGCGCG CGAAGCGCGC AAGGGCGCGG GCAAGATCGG TACGACCGGC
CGCGGCATCG GCCCTGCGTA CGAAGACAAG GTCGGCCGCC GCGCGCTGCG CGTGCAGGAC
CTGTTCGACG CGAAGACCTT CGCCGACCGC CTGCGCGAAA ACCTCGATTT CCACAACTTC
GTGCTGACCC AGTACCTGGG CGGCGCAGCC GTCGATTTCC AGGCCACGCT CGACACGATG
CTCGGCTATG CCGATCGCCT GAAGCCGATG GTGGCCGACG TGTCGCGCCG CCTGTACGAC
GCGAACAACG CCGGTCAGAA CCTGCTGTTC GAAGGCGCGC AAGGCACGCT GCTCGACATC
GACCACGGCA CTTATCCGTT CGTCACGTCG AGCAACTGCG TCGCGGGTGC GGCATCGGCC
GGCGCCGGCG TCGGTCCGCA GCAGCTGAAC TACATCCTCG GCATCACGAA GGCGTATTGC
ACGCGCGTCG GCGCGGGCCC GTTCCCGAGC GAGCTGTACG ATGCGGACAA CCCGCAGCGT
CAGGACCAGG TCGGCGTCAC GCTGGCGAAC GTCGGCAAGG AATTCGGCTC GGTCACCGGC
CGTCCGCGCC GCACCGGCTG GCTCGACGCA GCCGCACTGC GCCGCTCGAT CCAGATCAAC
GGCGTGTCGG GCCTCTGCAT GACGAAGCTC GACGTGCTCG ACGGCCTCGA TGAAGTCAAG
CTGTGCGTCG GCTACAAGAT CGACGGCAAG GACGTGGACA TCCTGCCGCG CGGTGCGGCC
GATGTCGCGC GTTGCGAGCC CGTGTACGAA ACCTTCGCCG GCTGGAAGGA AAGCACCGTC
GGCATCAAGA CGTGGGACGC GCTGCCCGCG AATGCGCAGG CCTATCTGAC CCGTGTCCAG
GAAGTGGCCG GCGTGCCGGT CGACATGGTT TCGACCGGCC CCGATCGCGA CGAAACGATC
CTGCTCCGCC ATCCGTTCAA GGTGTAA
|
|---|
| Protein sequence | MSASAVNVTP GRNVVVVGTQ WGDEGKGKIV DWLTDHAQGV VRFQGGHNAG HTLIIGGKKT
ILRLIPSGIM REGVACYIGN GVVLSPEALF KEIGELEEAG VNVRDRLFIS EATTLILPYH
IAIDQAREAR KGAGKIGTTG RGIGPAYEDK VGRRALRVQD LFDAKTFADR LRENLDFHNF
VLTQYLGGAA VDFQATLDTM LGYADRLKPM VADVSRRLYD ANNAGQNLLF EGAQGTLLDI
DHGTYPFVTS SNCVAGAASA GAGVGPQQLN YILGITKAYC TRVGAGPFPS ELYDADNPQR
QDQVGVTLAN VGKEFGSVTG RPRRTGWLDA AALRRSIQIN GVSGLCMTKL DVLDGLDEVK
LCVGYKIDGK DVDILPRGAA DVARCEPVYE TFAGWKESTV GIKTWDALPA NAQAYLTRVQ
EVAGVPVDMV STGPDRDETI LLRHPFKV
|
|---|
| |