| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1706 |
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| Symbol | |
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| ID | 6176446 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 1905510 |
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| End bp | 1907753 |
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| Gene Length | 2244 bp |
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| Protein Length | 747 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641681465 |
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| Product | helicase c2 |
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| Protein accession | YP_001808407 |
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| Protein GI | 172060755 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1199] Rad3-related DNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.702036 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAATTCAC CGCTTGAAGC CAACCCCGAT GCCCGGCCTG ACGCGTCGTC TGCCGGGCGC
GTTCGTGCGC CCGAAGGCAC CTTCGAGCTG AGCCGCAAGC GCGTCGACGA ACTCGACACG
ATCTTCGGTG AAGGCGGACT GCTTGCGCGC GCGCTCGACG GCTATCATCC GCGTCAGTCG
CAGATCGAGA TGGCGCGCGC GGTCGCGTCC GCGATGGAGG CGTCCGCGCG CCGGCTGCCC
GAACCGGAAA TCTTCGAAAC CCGCAAGCGG CCCGCGCGCC GCCTCGGCGA AGGCGACAAG
GCGGCTGAAC CCGCCGCTGA CGGAGCGGCG GCCGACGCCG ACAGCGACGC CGGCGACAAC
ACGCTGATCG TCGAGGCAGG CACCGGTACC GGCAAGACCT ATGCGTACCT GGTGCCCGCG
ATGCTGTGGG GCGGCAAGGT GATCGTGTCG ACCGGCACGA AGCACTTGCA GGACCAGCTG
TTCCAGCGCG ACATCCCGAC CGTGCGCAAC GCGCTCGCGG TGCCGGTGAC GGTCGCGATG
CTCAAGGGCC GCTCGAACTA CCTGTGCCAT TACTATCTGC AGCGCACGGC CGACAACGGC
CGCCTGCCGT CGCGGCAGGA CACCGCCTAC CTGCAGGAAA TCGTCCGGTT CGCGAAGATC
ACGAAAAGCG GCGACAAGGC CGAGCTCGCG AGCGTGCCGG AGACGGCGCC GGTGTGGTCG
ATGGTCACGT CGACGCGCGA CAACTGCCTC GGTCAGGAGT GCCCGCATTA CAAGGAGTGC
TTCGTGATGC AGGCGCGGCG CGAGGCGCAG CAGGCCGACG TCGTCGTCGT CAACCATCAC
CTGTTCTTCG CGGACATCAT GCTGCGCGAC ACAGGGATGG CCGAGCTGCT GCCGAACGCG
AACACGGTGA TCTTCGACGA AGCGCACCAG CTGCCGGAGA CGGCGACGCT GTTCTTCGGC
GAGACGCTGT CGACCACGCA GATCCTCGAA CTCGCACGCG ACACGGTCGC CGAAGGCTTG
AGCCATGCGC GCGATGCGGT CGAGTGGGTG AAGCTCGGCG GCGATCTCGA ACGCGCGGCG
CGCGACCTGC GCCTCGCATT CGCGAATGAC CAGATCGTGC GCATGTCGCT CGCGCAACTG
GGCGACGATC ACCCGATGTT CGGCGCACTC GACGCGCTCG AGGCGGCGCT CGATGCGCTC
GCATCGGCGC TCGCGAGCCA GGCCGAGCGG GCGGAATCCC TCGGTGCGTG CCTGCGGCGC
GCGCGCGAGC TGCAGGACCT GCTCGCGGGC TGGGTCACGC CCGGGGCGGC GCAAGCGGCC
GCGCAGGCCG ATGCCGCGGC AGCCGGCGAC AAGGCGGGTG CCGACGATCC GAACGAGAAG
GTGCGCTGGG TCGAAGTGTT CGCGCATACC GTCCAGCTGC ACGAGACGCC CTTGTCGGTC
GCGCCGATCT TCGCGAAGCA GCGCGCCGGC GTGCCGCGCG CGTGGGTCTT CACGTCGGCG
ACGCTGTCGG TGCGCGGCGA CTTCACGCAC TACGCGGCCC AGATGGGCCT CAGCTCGCGG
CGCTCGATGA CGCTCGCGAG CCCGTTCGAC TATCAGACGC AGGGCCTGCT GTACGTGCCG
CGCAACCTGC CGCAGCCGTC GTCGCCGGCG TTTACCGACG CCGTATTCGA TGCCGCGCTG
CCGGCGATCG AGGCGTCGGG CGGCGGCGTC TTCATGCTGT GCACGACGCT GCGTGCGGTC
GACCGGATCG CGTCGAAGCT GCGCGACGTG ATCGAGTCGC GCGGCTGGAA CACGCCGCTG
CTGGTGCAGG GCGATGCCAG CCGCACCGAG CTGCTCGACC GCTTCCGTTC GTACGGCAAT
GCGATTCTCG TGGGCAGCCA GAGCTTCTGG GAAGGTGTCG ACGTGCGCGG CGACGCGCTG
TCGCTCGTCG TGATCGACAA GCTGCCGTTC GCGCCGCCCG ACGATCCGGT GCTCGCCGCC
CGACTCGATG CGCTGACCAA GAAGGGCTTG AGCCCGTTCG CGGTCCACCA GCTGCCGCAG
GCCGTGATCA CGCTGAAGCA GGGCGCGGGC CGCCTGATTC GCGCGGAGAC CGATCGCGGC
GTGCTGATGA TCTGTGACAC GCGGCTGGTC GACAAACCGT ACGGTCGCCG GATCTGGCAG
AGCCTGCCGC CGTTCAAGCG CACGCGCGAG ATCGCGGTCG TGCAGGACTT CTTCGACGAA
CATCGCGCGG AAAAGCGCGC GTGA
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| Protein sequence | MNSPLEANPD ARPDASSAGR VRAPEGTFEL SRKRVDELDT IFGEGGLLAR ALDGYHPRQS
QIEMARAVAS AMEASARRLP EPEIFETRKR PARRLGEGDK AAEPAADGAA ADADSDAGDN
TLIVEAGTGT GKTYAYLVPA MLWGGKVIVS TGTKHLQDQL FQRDIPTVRN ALAVPVTVAM
LKGRSNYLCH YYLQRTADNG RLPSRQDTAY LQEIVRFAKI TKSGDKAELA SVPETAPVWS
MVTSTRDNCL GQECPHYKEC FVMQARREAQ QADVVVVNHH LFFADIMLRD TGMAELLPNA
NTVIFDEAHQ LPETATLFFG ETLSTTQILE LARDTVAEGL SHARDAVEWV KLGGDLERAA
RDLRLAFAND QIVRMSLAQL GDDHPMFGAL DALEAALDAL ASALASQAER AESLGACLRR
ARELQDLLAG WVTPGAAQAA AQADAAAAGD KAGADDPNEK VRWVEVFAHT VQLHETPLSV
APIFAKQRAG VPRAWVFTSA TLSVRGDFTH YAAQMGLSSR RSMTLASPFD YQTQGLLYVP
RNLPQPSSPA FTDAVFDAAL PAIEASGGGV FMLCTTLRAV DRIASKLRDV IESRGWNTPL
LVQGDASRTE LLDRFRSYGN AILVGSQSFW EGVDVRGDAL SLVVIDKLPF APPDDPVLAA
RLDALTKKGL SPFAVHQLPQ AVITLKQGAG RLIRAETDRG VLMICDTRLV DKPYGRRIWQ
SLPPFKRTRE IAVVQDFFDE HRAEKRA
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