Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_1658 |
Symbol | |
ID | 6177293 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 1853629 |
End bp | 1855410 |
Gene Length | 1782 bp |
Protein Length | 593 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641681419 |
Product | putative voltage-gated ClC-type chloride channel ClcB |
Protein accession | YP_001808361 |
Protein GI | 172060709 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0038] Chloride channel protein EriC |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTCGCG TCGTTTTCCT TCGTCCTCTT CATCAATCTC TTTCAGCCGT GCTCTCGTTC CTGCTGAAGC TGCGCACTCG CGCCCAGACG CTGTTCCGCC TGTCGGACGC CCATACGATG CTGATCTGGT CGGCCGTCGT CGGCGTCGGC GGCGCCTTCG CCACCATGAC GTTCCGCGAA GGCATCGACC TGATGCAGCA CCTGATCTCC GGGCACAGCG GCAGCTTCGT GCAGATGGCG AGAAGCCTGC CGTGGTACGT GCGCTTCTGG ATGCCGGCCG CGGGCGGCTT CCTGGCCGGC TGCGTGCTGC TGCTCGCGAC GCGCGGCGAC AGCAAGGCCG CCAAGACCGA CTACATGGAA GCCGTCGCGC TCGGCGACGG CGTCGTGCCG GTGCGCCAGA GCCTGTGGCG CAGCGTGTCG TCGCTGCTGA CGATCGGCAG CGGCGGCTCG ATCGGCCGCG AAGGCCCGAT GGTGCAGCTC GCGGCGCTGG CCGCGTCGCT GGTCGGCCGC TTCGTGCACT TCGACCCGCC GCGCCTGCGC CTGCTCGTCG CCTGCGGCGC GGCGGCCGGT ATCACGTCCG CGTACAACGC GCCGATCGCC GGCGCGTTCT TCATCTCCGA AATCGTGCTC GGCACGATCG CGATGGAGAG CTTCGGGCCG ATGGTCGTCG CGTCCGTCGT CGCGAACATC GTAATGCGGG AATTCGCCGG CTACCGGCCG CCGTACGAGA TGCCGGTGTT CCCGGCCGTG ACGGGCCCCG AGGTGCTGCT GTTCGTCGTG CTCGGCGCGC TGTGCGGCGT GCTCGCGCCG CAGTTCCTGC ATCTGCTCGA TGCGTCGAAG AACCAGTTCA AGCGGCTGCC CGTGCCGCTG CCGGTGCGGC TCGCACTCGG CGGCCTGGTG GTCGGCGTGA TCTCGGTGTG GATTCCGGAC GTGTGGGGCA ACGGCTACAG CGTCGTGAAC CACATCCTGC ATGCGCCGTG GACCTGGCAG GCGCTCGTCG CGGTGCTGGT GTTCAAGGTG ATCGCGACCG CCGCGACGGC CGGCTCGGGC GCGGTCGGCG GCGTGTTCAC GCCGACGCTG TTCGTCGGCG CCGTGTTCGG CTCGCTGTTC GGCCTCGCGA TGAACGCGCT GTGGCCGGGC CACACGTCCG CGTACTTCGC GTATGCGATG GTCGGGATGG GCGCATTCAT GGCCGGCGCC ACGCAGGCGC CGCTGATGGC GATCCTGATG ATCTTCGAGA TGACGCTGAG CTACCAGGTC GTGCTGCCGC TGCTGGTGTC GTGCGTGTTC GCGTATTTCG TCGCGCGCGC GACCGGCACG ACGTCGATGT ACGAGATCAC GCTGCGCCAC CACCAGGACG CGCAGGAACG GCTGCGGCTG CGCACCACGC AGATGCGCGA ACTGATCCAG CCCGCGCAGA CGGTCGTGCC GCTCGCCGCG AGCGTCGCCG ACATGACGCG CGTGTTTCTC GAATATCCGG TGAAGTATCT GTACGTGACC GACGACGCCG GGCGCTTTCG CGGCGCGGTC GCATTGAAGG ACATCACGTC CGACCTGCTC GACAAGCGCG ACACGACCGA CAAGACGGCC GCGCACTACG CGCACACGCC GTTTCCGCTG CTCACGCCCG ACATGCCGCT CGCGACCGCG CTCGAACGCT TCATGGCGTT CCAGGGCGAA CGGCTGCCGG TGATCGAAAG CGAAGCCGAG CCGACGCTCG CGGGAGTCGT CTACAAGACG TCGCTGCTCG ACGCGTACCG CCGGATGACC GGCGAGCGCT GA
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Protein sequence | MLRVVFLRPL HQSLSAVLSF LLKLRTRAQT LFRLSDAHTM LIWSAVVGVG GAFATMTFRE GIDLMQHLIS GHSGSFVQMA RSLPWYVRFW MPAAGGFLAG CVLLLATRGD SKAAKTDYME AVALGDGVVP VRQSLWRSVS SLLTIGSGGS IGREGPMVQL AALAASLVGR FVHFDPPRLR LLVACGAAAG ITSAYNAPIA GAFFISEIVL GTIAMESFGP MVVASVVANI VMREFAGYRP PYEMPVFPAV TGPEVLLFVV LGALCGVLAP QFLHLLDASK NQFKRLPVPL PVRLALGGLV VGVISVWIPD VWGNGYSVVN HILHAPWTWQ ALVAVLVFKV IATAATAGSG AVGGVFTPTL FVGAVFGSLF GLAMNALWPG HTSAYFAYAM VGMGAFMAGA TQAPLMAILM IFEMTLSYQV VLPLLVSCVF AYFVARATGT TSMYEITLRH HQDAQERLRL RTTQMRELIQ PAQTVVPLAA SVADMTRVFL EYPVKYLYVT DDAGRFRGAV ALKDITSDLL DKRDTTDKTA AHYAHTPFPL LTPDMPLATA LERFMAFQGE RLPVIESEAE PTLAGVVYKT SLLDAYRRMT GER
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