| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1625 |
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| Symbol | |
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| ID | 6176420 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 1824992 |
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| End bp | 1825885 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641681386 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001808328 |
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| Protein GI | 172060676 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0991587 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.570552 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGAACC CGCTTCATTT CGATCTGCAA TCGCTGCGCG TGTTCGCGCT CGTCGCCGAG
CACGGCAGCC TGACCAAGGC GGCCGAACAC GGCCAGCTCA CGCTGTCAGC GGTCAGCAAG
CGGATCGCCG AGCTCGAGAG CGTGACCGGC AGCGCGCTGT TCGTGCGGCA TGCGCGCGGC
GTCGAGCTGA CGCCCGCGGG CCGCGCCCTG CTCGAGCATG CGGCGAAGGT CATCGAGCAG
GTCAACCGGA TGGCGCACGA GATGAGCGAC TACGTCGCCG GCGTGCGCGG TCACATTCAC
GTGTGGACCA ACACGTCGGC CATCGTCCAG TTCCTGCCGG CCGATCTCGC CGCGTTCCTC
ACCGACAACC CCGGCATCAA GATCAGCCTC GAGGAGCGGC TGAGCCACGA GATCGTCGAC
GCGCTCGGCT CCGGCAAGGC CGATCTCGGC GTGTTCGCGG ACAACGTGCC CGCACCCGGC
ATCGAACGGC GGCTGTACCG GCGCGACGAG CTCGTGCTGC TCGTGCCGCG CGGGCATCGC
TTCGCCGAGC ACGACAGCAT CCGCTTCGCG GATACGCTCG ATGAAGACTA CGTCGGCCTG
AGCGACGGCA GCTCGCTGCT GGCGCGAATG ACCGACGCCG CGTTCGCGGC CGAGCGCTCG
CTGAAGCTGC GCATCCAGGT ATCGAATTTC GACGGCGTGA GCCGGATGAT CGAGGCCGGG
CTCGGGATCG GCGTGCTCCC GCGCGACGCG GTGACCGGCG AGCGCGCGGC GCGGCTCGGG
GTCGTGAAGC TCGACGACGC ATGGGCGACG CGCACGCTGT GGGTCGGCGT GAAGGCCGGC
ACCGTGCTGA CCACCGACAT CGCGAAGCTG TTCGATTTCA TGTCGGCGCG CTGA
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| Protein sequence | MVNPLHFDLQ SLRVFALVAE HGSLTKAAEH GQLTLSAVSK RIAELESVTG SALFVRHARG
VELTPAGRAL LEHAAKVIEQ VNRMAHEMSD YVAGVRGHIH VWTNTSAIVQ FLPADLAAFL
TDNPGIKISL EERLSHEIVD ALGSGKADLG VFADNVPAPG IERRLYRRDE LVLLVPRGHR
FAEHDSIRFA DTLDEDYVGL SDGSSLLARM TDAAFAAERS LKLRIQVSNF DGVSRMIEAG
LGIGVLPRDA VTGERAARLG VVKLDDAWAT RTLWVGVKAG TVLTTDIAKL FDFMSAR
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