| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1616 |
|---|
| Symbol | |
|---|
| ID | 6176080 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010551 |
|---|
| Strand | + |
|---|
| Start bp | 1812949 |
|---|
| End bp | 1816671 |
|---|
| Gene Length | 3723 bp |
|---|
| Protein Length | 1240 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641681377 |
|---|
| Product | multi-sensor hybrid histidine kinase |
|---|
| Protein accession | YP_001808319 |
|---|
| Protein GI | 172060667 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.98218 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.696471 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACATCA AGGCGAAGCT CGTCACCAGC ACCAGCCTGA TGCTGCTCGG CGCGGTGGCG
ATTGCCATGA CCAGCCTGAT CTCCGTGCAC GGTATCGCAT CCGGCGTGCG CACGCTGACG
ACGGAATCGC TGCCGCTGCA GATGCACAGC AACGAGCTGC AGCGCGCGTA CGCGGAACTC
GCGGTGAATT TCGGCGAGCT CGAGCGGGCG CGGGACGCAT CGGAGCGCGA GCAGTCGTCG
TCGGAGATCG ACACGCAATT GCAGCGCATC GCACGCATCA CGGCGGCCGT GCGCGCGATC
GACGGGCACG ACGGCATCGA CGCGCCGTCC GCCGATCTGC GCACGATGCT CGGATCGATG
AACGAAGGCG TCGACAAGCG CCTGCGGGGC GACGCGCAAC TCGTCGCCGA ACGCCAGCTG
ATCGAACGCG TGCAGGCACG GGGCACCACG CTGCTGAGCG AGATCGGCAA GGAAACCGAA
CGGCTGGGCG CCGACGCCGA TGCGAGGGTG AACGACGCGC TCGCGGCCAA TACCGCCTAC
AACCGGACGA TTCATGCGCT CGACCAGGTC CGGACGAACG TCAAGGACGT CACGACCGTC
GCCAGCCGCG TCGACGTCGC GCCGAACCGA TATCGGCTCG CGCCGCTGCG CGAGCGCATG
CAGGCGTCCG TCGACGGCGC GCGCAACGCG CTCGCGATCG CGGCGCCGAA CCTCGATGCC
GCGACCGCGC AGGGCATCAC GAGCGCGCTC GGGCGCGTCG CGGCCGACAT CTTCGACGGC
AACGACGGGC TCGTCGCGCT GCGCGCCGGC ATGTTCGCGC AACCGGCCGT CACGGCGCGC
TACCGCGCGA AAGAGGACCA GGTGCTGCGC TCGCTCGACG CGCTGGATGT GAAGCTCGCG
GAGATCGCCG ATCCGTTCGC GTTGCGGATC GTCGCTGCGC GCCAGCGCCT CGACGAAGCG
ATCGCGTTCC GGGGCCGCGC CGCGCGGATT GCGTCGCTGT CGGCGGCCGT GAACGGCGGC
ATCAACGCAC TGGCGTTCCA CCTGCGCATG GTCGCGCAAA GCGAGACGGC CGAGCGCCTG
AAGTATGCCG ACGCCGAGCT GCACAAGCTT GCCGGCGCGC TCGCGCAGTC CGCGAGCGCA
CTGCGCGACG CCCTCGTCAC GGACGGGCAG GGCAACGCGA AGCGCGCGCA GGCCGTGGTT
GCGCTCACCA CGGAACTCGC CGGCGCCGCG CGCCGCATCG TCGCGGTGAA GTCGGACATG
CTGTCCAACG ACGTGGCGAT GCAGCGCATC GTCGCGGACG TCGACACCAC CGCCAATCGC
CTCGCGGCCT ATACCGAACA GCAGGCGGTG CGCGTCGATC TGCAACAGCG CGGCATCGTG
TCGGACGTGT ACCGCGCCGT GACGAGCGCG TTCCTGATGA TCGTGGTGGT CTCGTTCCTG
CTCGCGATCG GCGGGTTCGT GATCAGTCAT CGGCTCGGCA CGTCGATCGC GCGCCCGCTG
TCGAGCCTGA CGCGCACGAT GGCGCGCATC CGCAGCGGCA GCGACCTGTC GCTGCGCATG
TCCCACAAAG GCCGCGACGA AATCGCGGCG CTGATCGCCG GCTTCAACAT GATGCTCGAT
GAAATCGAGC GGCGCGACGT CGATCTGCAG GCGGCGATCG CGACGGCCGA AGCCGCGAAT
TCCGCGAAAT CGGATTTTCT CGCGAGGATG AGCCACGAGA TCCGCACGCC GATGAATGGC
GTGCTCGGCA TGACCGAGCT GCTGCAGCGC ACACGGCTGA CGTCGAAGCA ACGCAAGTTC
GTCGACACCG TGTATCGATC CGGACAGACG CTGCTCGTCA TCATCGACGA CATACTCGAT
TTTTCGAAGA TCGAGGCGGG CAAGCTGACG CTGGAGCGCA TCGATTTCAA CCTGCATCAA
TTGCTCGACG ATGTCGTCGC GCTGATGGAG CCCAACGCCC GGCGCAAGGA ACTCGAGCTC
GTGTACCAGC GCGCCGATTC CGTTCCGCAG CGGATGCGCG GCGACCCGGT CCGCCTGCGC
CAGATCCTGA CGAACCTGCT CGGCAATGCG ATCAAGTTCA CCGAGCACGG GCACGTCGCG
CTGAGCGCCG AGTATTCGGA CGACGGGCGC ATCGTGTTCA AGATCGCCGA CAGCGGCATC
GGCATCGCGC CCGATGTCGC CGCACAGTTG TTCCGGCCGT TCCAGCAGGC CGACAGTTCG
ACCGCGCGCA AATACGGCGG CACCGGCCTC GGGCTCGCGA TTTCCCGCCA GCTCGCCGAG
ATGATGGGCG GCACGCTCGC GCTCGACTCG ACGCCCGGCA AGGGCTCGGT ATTCACCGTG
ACGACGCCGT TCGAGCCGGC ATCCGGCGAG GTCGGCGTCG CGGCGCACGG AAGGCCGTCG
CTCGCCGGCC TGAGGGTGCT GATCGTCGAC GACAGCGAGA CCGATCGCAG CGTGCTGCTC
GAACATGCGA TCGAATGGCA CCTGTGCGTC GCCTCGGCGA TCGGCGGCGA CGATGCGTTG
TCGCAGTTGC GGGCCGCCGT CGCCGACGGT GCGCCGTTCG ACCTCGCGAT CATCGATGTG
CGGATGCCGG GCATGGACGG CATCTCGCTC GTGCAGCACA TCCGCCACGA TCCGTCGCTG
CGTGCGCTCA GGATCATCAC GCTGACCGCG TTCGAGATGA TGGACAGCAT CCAGGTCGCG
CACGAACTCG ACATCGCCGC CCGGCTGACG AAACCGCTCC ATGGCAACGA TCTCTACACG
GCGATCGCCG CGGCGGTGCA CGTGATGCCG CCCCGGCTGG CGTCCGCCGC GCCGGTGTCG
GATGAAGCCG GACCGAACCC GGGCAGGCCG CTCGACGAGA TCGCCGCGCG CGTGCTGCTG
GTGGAGGACA ACGCGGTGAA TCAGCAGATC GCGCTCGCGA TGCTCGAAGA CACCGACTAT
CGGGTCGCCG TGGCCGACGA CGGCGAGCAG GCATTGAAGA TGCTCGAGCA ACACGCTTTC
GACGTGGTGC TGATGGACTG CCAGATGCCG GTGCTGGACG GCTTCGAGGC GACGCGGCGG
CTGCGTCGGC GCGAAGCCGA AGCGGGCGCG CCGCGCCTGC CGGTCATCGC CCTGACGGCC
AATGCGCTCA GCGGCGACCG CGAGCGCTGC CTGGCCGCCG GCATGGACGA CTATCTCGGC
AAGCCGTTCC GCCGCGACGC ACTGCTGCAG ACGCTCGCAC GTCATGTTCG CGGCGGCGCA
CACGTGCCGG TCGCCGCGAG CGAGAACGCG GAAGCGGTGG CCCGGACCGG TATCGAAACG
AACCTCGAAG CAAGCATCGA AACGCGTCCC GCAACGAGCG CGGCCGCGGC CGCCGATCCG
GACGAGGACG CAAATGTGAT CGACCGCAAG GCGCTCGATG CATTGCGCGC GCTCCAGCGG
CCCGGGCGCC CGGACGTGCT GACCCGGATC ATCGATCAAT TCACGATGGA CGCGCCGCGG
CTGATCCGCG ACATGCACGC GGCGGTCGAA GCGGGCGACG CCGACGCGCT GAAGCTTGCC
GCCCATACGC TGAAATCGAG CAGCGCGAAC GTCGGCGCGC ATCTGCTGTC GGCCCGCTGC
CGCGAGATCG AGCGGCTGGC GCGCGCCGCC GACGTGAACG CGGCCGTCGA GCTCGTCGCC
GGCACGGATG CGGAATTCGA ACAGGCGCAC GCCGCGCTGA TCGCGGAGCG CGTCGAAAGT
TGA
|
|---|
| Protein sequence | MDIKAKLVTS TSLMLLGAVA IAMTSLISVH GIASGVRTLT TESLPLQMHS NELQRAYAEL
AVNFGELERA RDASEREQSS SEIDTQLQRI ARITAAVRAI DGHDGIDAPS ADLRTMLGSM
NEGVDKRLRG DAQLVAERQL IERVQARGTT LLSEIGKETE RLGADADARV NDALAANTAY
NRTIHALDQV RTNVKDVTTV ASRVDVAPNR YRLAPLRERM QASVDGARNA LAIAAPNLDA
ATAQGITSAL GRVAADIFDG NDGLVALRAG MFAQPAVTAR YRAKEDQVLR SLDALDVKLA
EIADPFALRI VAARQRLDEA IAFRGRAARI ASLSAAVNGG INALAFHLRM VAQSETAERL
KYADAELHKL AGALAQSASA LRDALVTDGQ GNAKRAQAVV ALTTELAGAA RRIVAVKSDM
LSNDVAMQRI VADVDTTANR LAAYTEQQAV RVDLQQRGIV SDVYRAVTSA FLMIVVVSFL
LAIGGFVISH RLGTSIARPL SSLTRTMARI RSGSDLSLRM SHKGRDEIAA LIAGFNMMLD
EIERRDVDLQ AAIATAEAAN SAKSDFLARM SHEIRTPMNG VLGMTELLQR TRLTSKQRKF
VDTVYRSGQT LLVIIDDILD FSKIEAGKLT LERIDFNLHQ LLDDVVALME PNARRKELEL
VYQRADSVPQ RMRGDPVRLR QILTNLLGNA IKFTEHGHVA LSAEYSDDGR IVFKIADSGI
GIAPDVAAQL FRPFQQADSS TARKYGGTGL GLAISRQLAE MMGGTLALDS TPGKGSVFTV
TTPFEPASGE VGVAAHGRPS LAGLRVLIVD DSETDRSVLL EHAIEWHLCV ASAIGGDDAL
SQLRAAVADG APFDLAIIDV RMPGMDGISL VQHIRHDPSL RALRIITLTA FEMMDSIQVA
HELDIAARLT KPLHGNDLYT AIAAAVHVMP PRLASAAPVS DEAGPNPGRP LDEIAARVLL
VEDNAVNQQI ALAMLEDTDY RVAVADDGEQ ALKMLEQHAF DVVLMDCQMP VLDGFEATRR
LRRREAEAGA PRLPVIALTA NALSGDRERC LAAGMDDYLG KPFRRDALLQ TLARHVRGGA
HVPVAASENA EAVARTGIET NLEASIETRP ATSAAAAADP DEDANVIDRK ALDALRALQR
PGRPDVLTRI IDQFTMDAPR LIRDMHAAVE AGDADALKLA AHTLKSSSAN VGAHLLSARC
REIERLARAA DVNAAVELVA GTDAEFEQAH AALIAERVES
|
|---|
| |