| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1559 |
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| Symbol | |
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| ID | 6176262 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 1744798 |
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| End bp | 1749807 |
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| Gene Length | 5010 bp |
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| Protein Length | 1669 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641681320 |
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| Product | amino acid adenylation domain-containing protein |
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| Protein accession | YP_001808262 |
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| Protein GI | 172060610 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1020] Non-ribosomal peptide synthetase modules and related proteins |
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| TIGRFAM ID | [TIGR01733] amino acid adenylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.203226 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.322584 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAAGG TTCAACCCGA CTGGCTCGCG CTCGCGACGC GTTTCGCGCA ACTGCCCGAC
GTGCAGCGCG CGGTGTTCAT CGACAAGCTC GGCGCGGCCG GCATCGATTT TCGCGTGCTG
CCGATCCCGC CGCGCACGCC GCGCGGCGAT CGCGTGCCGG CGTCGTTCGC GCAGACGCGG
CTGTGGCTGC ACGCGCGGCT GATCGACGCG CCGGACGCGT ATCACATCAC CGAGCGGCTC
GCGCTGACGG GCCCGCTCGA CACGCACGCG CTGCGGCTCG CGTGCGATGC GCTGATCGCG
CGCCATGAAG CGCTGCGTAC GACCTTCGAC GAAGCGGAGG ACGGTGTCGC GCAGACGATT
CATCCGCCGC TGCGCTGCCC GTGGCGCGAG ACCGATCTCG AGGCAGTGCC CGCTGCGCAG
CGCGTCGCGC GCGCCGAAAG CGTCGCCGCG GCCGACGAAG CCGCTGCGTT CGATCTCGGC
GCGGCGCCGC TCGTGCGCGC ACACCTGATC CGCTTCGATG GGACGCATCA CTGGCTCGCG
CTGACCGTGC ACCACATCGT GTCGGACGGC TGGTCGTCGG GCGTGATGCT GGACGAGCTT
GCTGCGTTCT ATCGCGCGTA TGCGTCTGGC AAGCCGGTGC CGCTCGCGCC GCTGCCGATC
CAGTACGCGG ACTATGCGTT GTGGCAGCGC CGCTGGCTCG ATGCCGGCGA ACGCGATCGC
CAGCTGGCGT TCTGGCGCGA ACGGCTCGAT CCGCAGCGCG GCGTGCTCAC GCTGCCCGGT
GCGGCCGCGC GGCCCGCACG CCGCAGCGCG CGCGGTGCAC GTCATGTGTT TTCGCTCGAC
ACCCGTATCG GTGCCCGGCT GCGCGCGTTC GCGGCCGCAT CGGGCGCGAC GCCGTTCGCG
GTGCTGCTCG CGGCGCTCGA CGCGCTGCTC GCGCGTGCGA CCGGCGATGC GCGGATCTGC
GTCGGCGTGC CGGCCGCGAA CCGCGAGCGC GCGGAAACGG CCGGCCTGAT CGGCTTCTTC
GTCAACACGC TCGCGATCGA CGTCGACGTG CCGGCACACG GCGATTTTGC GTCGCTGGTC
GCGCGCACGC AGCGCGCACT CGTCGATGCG CAGATGCACC AGGACGTGCC GTTCGAGCAG
GTGGTCGACG CGCTCGGCGT GCCGCGCAGC GCCAGCCACC ATCCGCTGTT CCAGGTGATG
GCCGCGTATG GCGAGCGCCG CGCGCTGCCG GCGCTCGGCG CGGCGTCGGC AGCGTTGCTG
CCGTCTGGCA CGCCGTCCGC GAAATTCGAC CTGACGCTTG CCGTCGAGGC GACGCCCGAC
GGCACGTTCG ATGCTGCATT CATCTACGCG CTCGACCTGT TCGACGCGGA CGCGATCGAG
CGGCTCGCCG CACGCTTCGT CACGCTGCTC GGCGACGCGC TCGCTCGTCC CGAGTTGCCG
ATCGGCGATC TCGACTGGCT GCCGGCCGAT GAACGCGCGC AACTGTTCGC ATGGAACGCA
CCGGCGGGCG CGGCCGAAGC CGAGCCGTTC GTGCCGGTGC ACGCGCGCAT CGCCGCGCAT
GCGCAGGCGC GGCCCGACGC ACGCGGCGTC GCCGACATCG ATCGCGCGCT GACGCGCGGC
GAGGTCGACG CGCGCGCGGC ACGCATCGCG CGCAATCTCG TCGCGGCCGG CGTGAAGCCC
GAGATGCGCG TCGGCGTCGC GCTGCAGCGT TCGGTCGACC TGCTGGTCGC GCTGATCGCG
GTGCTGAAGT CGGGCGCCGC GTTCGTGCCG CTCGACCCGG CTCATCCGCG CGAACGGCTC
GCGCAGATCG TCGGCGATGC GGGCATCGCG CACGTGCTGA CCGACGGCGC GAGTGTGGCA
TCGCTGCCCG AGCTGCCGGC ACTGCGTATC TGGCGCGCGG ACGAAGTCGA CGCGCTCGAC
GCGGCGGCCG ATGTCGCGCT GCCGGACGTG CTGCCCGGCC ACGCGGCGTA TGCGATCTAC
ACGTCGGGAT CGACCGGCAA GCCGAAGGGC GTGATCGTCG ATCACGCGGC GTTCGCACGG
CATTGCGTGG CGATTGCCGA GCGCTACGGC GCGGGCGAGA ACGACGTGTT CCTGCTGTTC
CAGTCGGTCA ACTTCGACGG CGCGCACGAA GGCTGGTTTT CTCAATACCT GTCGGGTGCC
GCCGTGTCGG TGACGGCCGA CGTGCTGTGG CCGCCCGCGC AGACCTGCGC GATGATGGTC
CGCGACGGCG TGACGATGAC CTACGTGCCG CCCGGCTGCG CGGCCCAGCT CGCCGAATGG
GCGCTCGCGC ACGGGGCGCC GCCGACGCTG CGCTCGCTGA CGGTCGGCGG CGAAGCGACG
TCGCGCGAAG CGTTCGCGAT GCTGCGCCGC GCGATGCCGA ACGTGCGCGT GGTCAACGGC
TACGGCCCGA CCGAAACCGT GATCACGCCG ACGCTGTGGA TGTTCCGTCC CGGCGACGAT
CTCGCGAAGC TGGGCGACGC CGCCTATCTG CCGATCGGCA CGCTGGTCGG CGCGCGCACC
GCGCATGTGC TCGACGAGCG GCTGCATCCG CTGCCGGTCG GCGTGATCGG CGAACTGTAC
CTGGGCGGCG AGGGGATCGG CGTCGCGCGC GGCTACCTCG ATCGTCCCGC GCTGACGGCC
GAGCGCTTCG TGCCGGATCC GTACGGCGCG CCGGGTGCGC GCCTGTACCG CACGGGCGAT
CTCGTGCGAC GCCGCGCGGA CGGCGTGTTC GACTTCATCG GCCGCGTCGA TCACCAGGTG
AAGCTGCGCG GGCTGCGCAT CGAACTCGGC GAGATCGAGG CCCAGCTGGC CGCTCACGAC
GCGGTGCGCG AAGCGTGCGC GGTCGTGCAC GGGCAAGGCG CGCACGCGCA GCTCGTCGCG
TACGTCGAAC TGAGCGCCGA TGCGCAGGCG GCCGCCCAGC CGGTCGAGGC CGCGACGCTC
GACGCGCACT TGCGCCGCAC GCTGCCCGAC TACATGGTGC CCGCGCAGCT GATCATGCTC
GATGCGCTGC CGCGTAATGC GAACAGCAAG GTCGACCGTG CGCGGCTGCC GGCCCCGGTG
CGCGTCGAAC GCGCATACGA AGCGCCGCAC GACGGCGACG AAACCGCGCT CGCGGCGATC
TGGCGCGATG TGCTGAACGT CGAACGCGTC GGCCGCGGCG ATCACTTCTT CGAACTCGGC
GGGCATTCGC TGGCGGCGGT GCGCGTCGCG ACGCGCGTCG CCGAGCGGCT CGGCCGCGAC
GTGCCGGTGC GGGCGCTGTT CGAAGCGCCG GTGCTCACGC AATACGCGCG CCAGGTGGCC
GACGCGCCGC GCGCCGCGCA CGCCGGGGCC GCTGCGCCGG GCGTCGCGGT GGTCAAACCC
GATGCGCATG GCGTATGGCC GCTGTCGCCC GCGCAGCTCG GCCTATGGTT TCTGTGGCGC
GCGCAGCCGG ACAGCGCCGC TTACAACATC CCGGTCGCGC TGCGCGTGCG CGGTCTGCTC
GACGTCGATG CGCTGCGCGC GGCGTTTTCG GCGGCGGCCG CCGCGCATCC GGCGTTGCGC
ACACGGCTCG TCGCGCGCGA CGGCATGCTG CCGGGCCAGC GCATCGACGC CGCGGGGCCC
GTCGCGCTGC CGCTCGTCGA CCTGTCCGCG CAGCCCGACG CGCTCGCCCG CGCGGCGGCG
CTGACCGACG TCGATGCGCT CGCGCCATTC GATCTCGCGG CCGATGCGCC ATTGTGGCGC
GCACGCGTTC TGCGGCTCGG CGCGGACGAT CATGTGCTGT CGGTGACGAT CCATCACATC
GTGTCGGATG GCGAATCGAT CGAACTGTGG CTCGACGCGG TGCGTGCGCG CTATGTCGCG
CTGGTTCGGG GCGACGCTTC GGCAGCGGAG GCACCGGCAG CACCGGCAGA GTCATCGACG
GAAAACACGT CGCTGGTGCT GCCCGCGCAG TGCCATCCCG CCCGCGTCGC GTACTGGCGC
GACGCGCTGG CCGACCTGCC GTCGTCCGTG CTGCCCCAGC GCGCCAACGC GCCGGCCGTC
CCGCAATGGC ATGCGGCGCG CGTCGCGTTC GAATTCGACG CGGCGCTGAT CCGCGCCGCG
CGCGACGCCG CGTCGGCCGC GCACGCGACG TTGCCGATGC TGCTGCACGC GGCGCTCAAC
ACCGCGCTGT TCCGCGTGAC GGGCGCGGCC GACCAGCCGG TCGGCGTGCT CGCGTCGACA
CGCGAGCTGA CGGGCGACGC GGCGCGCGAT GCGCTTGGCC TGTTCATCAA TTCCGTGGTC
GTGCGCACGC GGCTCGATGC GGCGGCCAGA CGCACGGACG TGCTCGCGCA GGTGCGCGAT
ACGGCGCTCG CCGCGTATGC GCATGCCGAC GTGCCGTTCG CCGACGTCGT CGCGGCGCTG
CGCGCGCCGC GTGCCGCGCA CGCCAATCCG CTGTTTCAGG TGATGTTCAA CTACCTGCGC
CCGACCGGCG CCGCCGCGCG CGACTGGGCC GGCCTGTCGC TCGGCGAATT CGACGACGTG
CGCCATCGCG TGGTGTTCAC GCTGGAGCTG GACGTCGTCG AGCATCCGGA CGGCCGCGTG
AGCGCCGCGT TTTCCTATGC GGACGAACTG CTCGACGGCC GCTTCGTCGA CGCGCTCGTC
GATCTCTATC ACGACGAAGT CGCGCGTTTT GCCGGTGCGC CGGAAGCGGC GCTCGGCGCG
CCCGATGCGC TGTTCGCCGC CCACACGGCG GCCGCGCCGG CCGGCGACGC GGCGCGCGTC
ACGGCATCGA GCGACGTCGC GGCGAACGCG GCAGCCGCGC TCGCCGCGCT GTGGTCGGAC
ACGTTCGCGA CGGCCGCGCC CGCACCCGAC GCCGACCTGT TCGAGGCCGG TGCGACGTCG
TTCGACGTCG TGCGCTTCGT CGACGCGGCC GGCCGCGCCG GTCATGCGCT GACGGTGGCC
GACGTGTTCG CATCGCCGAC GCTCGCGGCG CTCGGCGCGC GAATCGAGGC CTCGGCCGAA
ACGGAGCAGG AGGTGCGCGA TGCTGGCTGA
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| Protein sequence | MTKVQPDWLA LATRFAQLPD VQRAVFIDKL GAAGIDFRVL PIPPRTPRGD RVPASFAQTR
LWLHARLIDA PDAYHITERL ALTGPLDTHA LRLACDALIA RHEALRTTFD EAEDGVAQTI
HPPLRCPWRE TDLEAVPAAQ RVARAESVAA ADEAAAFDLG AAPLVRAHLI RFDGTHHWLA
LTVHHIVSDG WSSGVMLDEL AAFYRAYASG KPVPLAPLPI QYADYALWQR RWLDAGERDR
QLAFWRERLD PQRGVLTLPG AAARPARRSA RGARHVFSLD TRIGARLRAF AAASGATPFA
VLLAALDALL ARATGDARIC VGVPAANRER AETAGLIGFF VNTLAIDVDV PAHGDFASLV
ARTQRALVDA QMHQDVPFEQ VVDALGVPRS ASHHPLFQVM AAYGERRALP ALGAASAALL
PSGTPSAKFD LTLAVEATPD GTFDAAFIYA LDLFDADAIE RLAARFVTLL GDALARPELP
IGDLDWLPAD ERAQLFAWNA PAGAAEAEPF VPVHARIAAH AQARPDARGV ADIDRALTRG
EVDARAARIA RNLVAAGVKP EMRVGVALQR SVDLLVALIA VLKSGAAFVP LDPAHPRERL
AQIVGDAGIA HVLTDGASVA SLPELPALRI WRADEVDALD AAADVALPDV LPGHAAYAIY
TSGSTGKPKG VIVDHAAFAR HCVAIAERYG AGENDVFLLF QSVNFDGAHE GWFSQYLSGA
AVSVTADVLW PPAQTCAMMV RDGVTMTYVP PGCAAQLAEW ALAHGAPPTL RSLTVGGEAT
SREAFAMLRR AMPNVRVVNG YGPTETVITP TLWMFRPGDD LAKLGDAAYL PIGTLVGART
AHVLDERLHP LPVGVIGELY LGGEGIGVAR GYLDRPALTA ERFVPDPYGA PGARLYRTGD
LVRRRADGVF DFIGRVDHQV KLRGLRIELG EIEAQLAAHD AVREACAVVH GQGAHAQLVA
YVELSADAQA AAQPVEAATL DAHLRRTLPD YMVPAQLIML DALPRNANSK VDRARLPAPV
RVERAYEAPH DGDETALAAI WRDVLNVERV GRGDHFFELG GHSLAAVRVA TRVAERLGRD
VPVRALFEAP VLTQYARQVA DAPRAAHAGA AAPGVAVVKP DAHGVWPLSP AQLGLWFLWR
AQPDSAAYNI PVALRVRGLL DVDALRAAFS AAAAAHPALR TRLVARDGML PGQRIDAAGP
VALPLVDLSA QPDALARAAA LTDVDALAPF DLAADAPLWR ARVLRLGADD HVLSVTIHHI
VSDGESIELW LDAVRARYVA LVRGDASAAE APAAPAESST ENTSLVLPAQ CHPARVAYWR
DALADLPSSV LPQRANAPAV PQWHAARVAF EFDAALIRAA RDAASAAHAT LPMLLHAALN
TALFRVTGAA DQPVGVLAST RELTGDAARD ALGLFINSVV VRTRLDAAAR RTDVLAQVRD
TALAAYAHAD VPFADVVAAL RAPRAAHANP LFQVMFNYLR PTGAAARDWA GLSLGEFDDV
RHRVVFTLEL DVVEHPDGRV SAAFSYADEL LDGRFVDALV DLYHDEVARF AGAPEAALGA
PDALFAAHTA AAPAGDAARV TASSDVAANA AAALAALWSD TFATAAPAPD ADLFEAGATS
FDVVRFVDAA GRAGHALTVA DVFASPTLAA LGARIEASAE TEQEVRDAG
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