Gene BamMC406_1553 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_1553 
Symbol 
ID6177257 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp1728094 
End bp1728945 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content72% 
IMG OID641681314 
ProductABC transporter related 
Protein accessionYP_001808256 
Protein GI172060604 
COG category[H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.620794 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.876561 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCGTA GTACCGCCGC GCTTGCCGCG CGCGGATTGA CGGTGGGTTA TCGCGACCAT 
GTCGTGATCG ACGGGCTGGA CCTGTCGATC GCGGCCGGCC GCGTCACGGC GCTGTGCGGC
CCGAACGGCT GCGGCAAGAG CACGCTGCTG CGTACGCTCG CGGGCCTGCA GCCCGCGCGT
GCGGGCCACG TCGACGTGAA CGGCACGCCG CTCGCGTCGT TTCGCCGTCG CGCGCTCGCG
CGCGAGCTCA CGATGCTCGC GCAGTTCAAC CAGATCCCGT CGGGGCTGAC CGTGCGCGAG
CTCGTCGCGT ACGGACGCTA CGCGTATGGC GGCTTTCTGC GCGGGCTCTC GCGTGCCGAC
CATGCGGCGA TCGACGAGGC GCTCGACACG AGCGGCCTTG CCGGCGACGC CGAGCGTGAC
GTCGGCGCGC TGTCGGGCGG CGAGCGCCAG CGGGCGTGGA TCGCGATGGC GCTCGCGCAG
CAGGCGCCGA TCGTGCTGCT CGACGAGCCG ACGACCTATC TCGACATCCA TCACCAGCTC
GACATCCTCG ACGCGCTGCG CGCGCTGAAC CGCGCGCGCG GGCTGACGAT CGTGTGGGTC
CTGCACGACC TGAACCAGGC GGCCGCGTAC AGCGACGAGA TCGTGCTGAT GCGGGCCGGC
CGCCTCGTGG CGCAAGGTTC GCCCGACGCG ATGCTGGAGC CGGCGCAGCT GCGCGCCGCG
TTCGGCGTCG ACATGCTGAA GCTCGCGCAT CCGCAGACGG GCGCGCCGAT GTGCGTGCCG
GCCTACGGGC CGCCGGCGTC CGGCACGCCG CACGCGTTCG AGCACGCGGT CGACCGGGAT
ATCGCCGTAT GA
 
Protein sequence
MTRSTAALAA RGLTVGYRDH VVIDGLDLSI AAGRVTALCG PNGCGKSTLL RTLAGLQPAR 
AGHVDVNGTP LASFRRRALA RELTMLAQFN QIPSGLTVRE LVAYGRYAYG GFLRGLSRAD
HAAIDEALDT SGLAGDAERD VGALSGGERQ RAWIAMALAQ QAPIVLLDEP TTYLDIHHQL
DILDALRALN RARGLTIVWV LHDLNQAAAY SDEIVLMRAG RLVAQGSPDA MLEPAQLRAA
FGVDMLKLAH PQTGAPMCVP AYGPPASGTP HAFEHAVDRD IAV