| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1522 |
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| Symbol | |
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| ID | 6175959 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 1683831 |
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| End bp | 1684781 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641681283 |
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| Product | periplasmic binding protein/LacI transcriptional regulator |
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| Protein accession | YP_001808225 |
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| Protein GI | 172060573 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.39428 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGACC TCTTTCGCCG TCGTTTCCTG ACCGCCGCGC TTGCCGCCGT CGCGGTCGCC
GCCGCACCGG CCGTCCACGC GCAAGCGCCG GCCAAGCCGA AGGTCGCGCT CGTGATGAAG
TCGCTCGCGA ACGAGTTCTT CCTGACGATG GAAACCGGCG CGAAGGAATA CCAGAAGCAC
AACGCCGGCC AGTTCGACCT GATCACGAAC GGCATCAAGG ACGAGACCGA CACCGCGAAC
CAGATCCGCA TCGTCGAGCA GATGATCGTG TCGAAGGTCG ATGCGATCGT GCTCGCGCCG
GCTGATTCGA AGGCGCTCGT GCCGGTCGTG AAGAAGGCGG TCGACGCGGG CATCATCGTC
GTGAACATCG ACAACCGGCT CGATCCGGAC GTGCTGAAGT CGAAGAACCT GAACGTGCCG
TTCGTCGGCC CCGACAACCG CAAGGGCGCG CGCAAGATCG GCGACTACCT TGCGAAGCGG
CTGAAGGCGG GCGACCAGGT CGGCATCCTC GAAGGCGTGT CGACGACGAC CAACGCGCAG
CAGCGCACGG CCGGCTTCCA GGATGCGATG AAGGCGGGCG GGATGAAGGT CGTGTCGGTG
CAGTCGGGCG AATGGGAGAT CGACAAGGGC AATGCGGTCG CATCCGCGAT GCTCAACGAA
TACCCGAACC TGCGCGCGCT GCTGTGCGGC AACGATAACA TGGCGATCGG CGCGGTGTCG
GCGGTGCGGG CGGCGGGCAA GCAGGGCAAG GTGTTCGTGG TCGGCTACGA CAACATCAAC
GCGATCAAGC CGATGCTGAA GGACGGCCGC GTGCTCGCGA CCGCCGACCA GTACGCGGCG
AAGCAGGCCG TGTTCGGCAT CGACACGGCG CTCAAGGCGA TTGCCGAGCA TCGCAAGCAG
GCCGACATGA CCGGTGTGGT CGAGACGCCG GTGGATCTCG TGACGAAGTA A
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| Protein sequence | MNDLFRRRFL TAALAAVAVA AAPAVHAQAP AKPKVALVMK SLANEFFLTM ETGAKEYQKH
NAGQFDLITN GIKDETDTAN QIRIVEQMIV SKVDAIVLAP ADSKALVPVV KKAVDAGIIV
VNIDNRLDPD VLKSKNLNVP FVGPDNRKGA RKIGDYLAKR LKAGDQVGIL EGVSTTTNAQ
QRTAGFQDAM KAGGMKVVSV QSGEWEIDKG NAVASAMLNE YPNLRALLCG NDNMAIGAVS
AVRAAGKQGK VFVVGYDNIN AIKPMLKDGR VLATADQYAA KQAVFGIDTA LKAIAEHRKQ
ADMTGVVETP VDLVTK
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