Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_1469 |
Symbol | |
ID | 6176429 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 1637906 |
End bp | 1638649 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641681228 |
Product | RNA methyltransferase |
Protein accession | YP_001808172 |
Protein GI | 172060520 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0566] rRNA methylases |
TIGRFAM ID | [TIGR00186] rRNA methylase, putative, group 3 |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCACGTC TGAAGGTTCT TTACGGTTTT CATGCGGTGA CCGCACGTTT GCGGCACGAT GCATCGACGG TTGCGGAGGT GCTGTACGAC CAGACGCGCC GCGACCGCCG CATGCAGGAC TTCCTGCACA CCGCGAAGGA AGCGGGCGTG CGGCTGATCG CGGCCGACGA AACTCGCCTG TGGGGCCTCG CGCATACCGA GCGCCACCAG GGCGTCGTCG CGCGCGTCGA GGACGTCCCC CTCGCGCAGA ATCTGTCCGA ACTGCTCGAC GGCATCCAGG GCCCGGCGCT TCTGCTGGTG CTCGACGGTG TCACCGATCC GCACAACCTG GGCGCATGCC TGCGTGTCGC CGATTCGGCA GGCGCGCATG CGGTGATCGC GCCGCGTGAC CGCGCGGTCG GCCTGAACGC GACCGCGGCG AAGGTCGCGA GCGGCGCGGC CGACACGGTG CCGTACATCA CGGTCACGAA CCTCGCCCGC GCGCTGCGCG AGCTGAAGGA AGCGGGCGTT TGGATCATCG GCACGTCGGA CGACGCGTCG GCGACGCTGT ACGACACGAA GCTCGACGGC CCCGTCGCCA TCGTGATGGG CGCGGAAGGC GAAGGCATGC GCCGGCTCAC GCGCGACACC TGCGACGACG TGATGAGCAT CCCGATGGCC GGCAGCGTGG AAAGCCTGAA CGTGTCGGTT GCAAGCGGCG TGTGCCTGTA CGAAGCGGTG CGGCAGCGGC GCGTGAAGGG CTGA
|
Protein sequence | MSRLKVLYGF HAVTARLRHD ASTVAEVLYD QTRRDRRMQD FLHTAKEAGV RLIAADETRL WGLAHTERHQ GVVARVEDVP LAQNLSELLD GIQGPALLLV LDGVTDPHNL GACLRVADSA GAHAVIAPRD RAVGLNATAA KVASGAADTV PYITVTNLAR ALRELKEAGV WIIGTSDDAS ATLYDTKLDG PVAIVMGAEG EGMRRLTRDT CDDVMSIPMA GSVESLNVSV ASGVCLYEAV RQRRVKG
|
| |