Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_1465 |
Symbol | |
ID | 6176781 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | - |
Start bp | 1629703 |
End bp | 1631256 |
Gene Length | 1554 bp |
Protein Length | 517 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641681222 |
Product | ABC transporter related |
Protein accession | YP_001808169 |
Protein GI | 172060517 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.748698 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGCGTT CTGAGTCGTC CCGGCCGCTG CTCGAGATGC GCCGGATCAG CAAGACGTTC CCGGCCGTGC GCGCGCTCGA CAACGTCAGC CTGACCGTCT ATCCGGGCGA GATCCATTCG CTGATGGGCG AGAACGGCGC AGGCAAGTCG ACGCTGATGA AGATCCTGTC CGGTGCGTAC CGCGCCGACG CCGGCGGCGA GATCCTGATC GACGGCGAGC GCATCGACGT CGACGGCCCG CTCGCCGCGC GCGATGCGGG CGTCGCGGTG ATCTACCAGG AGCTGTGCCT GGCGCCGAAC CTGACCGTCG CGGAAAACAT CTACGTCGGC CGCGAACTGC GGCGTGGCAA CCGGCGCTGG GGCACCATCG ACCGCGCGGC GATGGCGCGC GGCTGCCAGG ACGTGCTCGC CCGTCTCGGT GCGCCGTTCG GTCCGGACAC GCTGGTCGGC ACGCTGTCGA TCGCCGAGCA GCAGCTCGTC GAGATCGCGC GCGCCGTGCA CACCCGCGCG CGCATCCTCG TGATGGACGA ACCGACGACG CCGCTGTCGT CGCGCGAGAC CGAGCATCTG TTCGGCCTGA TCCGCCAGCT GCGCGAGGAA GGTCTCGCGA TCATCTACAT CAGCCACCGG ATGGCGGAAA TCTATGAACT GTCCGACCGC GTGTCGGTGC TGCGCGACGG CTCGTACGTC GGCACGCTCG AGCGCGAATC GCTGTCGGCC GAGCGGCTCG TCGCGATGAT GGTGGGCCGC GACATCTCCG GCTTCTACAA GAAGGAACAT GCGCCGTACG ACCCCGGTCA CCTGCTGCTG TCGGTGCGCG ACATCGCGGA CGCCGATCGC GTGCGCGGCT GCAGTCTCGA CCTGCACGCC GGCGAGGTGC TCGGCATCGC CGGGCTCGTC GGCGCGGGCC GCACCGAACT GGCGCGGCTG ATCTTCGGCG CGGAACCGCG CACGCGCGGC GACGTGAAGC TCGGCGACCG CGCGTTCGGC GCGCACTCGC CGCGCGACGC GATCGACGCC GGCCTCGTCT ACCTGACGGA AGACCGCAAG CGCCAGGGCC TGTTCCTCGA CATGAGCGTC CGCGACAACA TCAACATCTC CGTGTGCAAC CGCGATGCGC GGCTCGGTGC GCTCGATCTC GCCCGCGGTG CGCAACGCGC ACGCGACGCG ATCGCCTCGC TGTCGATCCG CGTGCCGAAC GCCAACGTCA ACGTCGGCGC GCTGTCCGGG GGCAACCAGC AGAAAGTGCT GCTGTCGCGC CTGCTCGAGA CGAAGCCGCG CGTGCTGATT CTCGACGAAC CGACGCGCGG CGTCGACATC GGCGCGAAAT CCGAGATCTA CCGGATCATC AACGAACTGG CCCGCGCGGG CGTCGGCGTG ATCGTGATCT CGAGCGAACT GCCGGAAATC ATCGGTGTCG CCGACCGCGT GCTCGTGATG CGCGAAGGCG AGATCGCCGG CGAACTCGGC GGCCACACGC ACACGCCCAT CACGCAGGAA GCGATCATCG CGCTCGCGAC CGGCTCGCAG GCCGAACTCG CCGACGCGCA CTGA
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Protein sequence | MSRSESSRPL LEMRRISKTF PAVRALDNVS LTVYPGEIHS LMGENGAGKS TLMKILSGAY RADAGGEILI DGERIDVDGP LAARDAGVAV IYQELCLAPN LTVAENIYVG RELRRGNRRW GTIDRAAMAR GCQDVLARLG APFGPDTLVG TLSIAEQQLV EIARAVHTRA RILVMDEPTT PLSSRETEHL FGLIRQLREE GLAIIYISHR MAEIYELSDR VSVLRDGSYV GTLERESLSA ERLVAMMVGR DISGFYKKEH APYDPGHLLL SVRDIADADR VRGCSLDLHA GEVLGIAGLV GAGRTELARL IFGAEPRTRG DVKLGDRAFG AHSPRDAIDA GLVYLTEDRK RQGLFLDMSV RDNINISVCN RDARLGALDL ARGAQRARDA IASLSIRVPN ANVNVGALSG GNQQKVLLSR LLETKPRVLI LDEPTRGVDI GAKSEIYRII NELARAGVGV IVISSELPEI IGVADRVLVM REGEIAGELG GHTHTPITQE AIIALATGSQ AELADAH
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