| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1456 |
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| Symbol | |
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| ID | 6178629 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 1618916 |
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| End bp | 1620670 |
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| Gene Length | 1755 bp |
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| Protein Length | 584 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641681213 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_001808160 |
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| Protein GI | 172060508 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.877669 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCTCAT CCGCAGCAAC CGCAACGTCC GAGCTCCCGC CGAACAGCGA CGGCGTCTGG
TACGCGTCGT ATCCGCCCGG CGTGCCGCAC GAGATCGACG TCACGCAATA CGCGTCGCTC
GTGCAGTTCT TCGACGAATG CACGACGCGC TTCGCCGAGC GGGTCGCGTA CGTGAGCGCG
GGCGCATCGA TGACCTATCG CACGCTCGCG CAGAAAGTCG ACGCGTTCGC GTCGTATCTG
CAAAGCATCG GCGTAAAGCC CGGCGACCGC GTCGCGATCA TGCTGCCGAA CACGTTCCAG
TACCCGGTCG CGCTGTTCGG CACGCTGAAG GCCGGCGCGA TCGTCGTCAA CGTGAATCCG
CTCTATACCG CGCGCGAACT CGCGCACCAA TTGAAGGACA GCGGCGCGCA GACGATCGTC
GTGTTCGAGA ACTTCGCACG CACGCTGCAG GAAGCGCTGC CGGAAACGCA GGTGAAGAAC
ATCGTTGTCA CCGCGCTCGG CGACCTGCTC GCCGACGGTT TCAATGCGAA GGGACGCCTG
ATCAACTTCG TGCTGAAGCA CGTGAAGAAG CTGGTGCCTG ACTACAGCCT GCCGCAGGCG
ATCCGGCTGC GCTCCGCCCT CGCGCTCGGC GCGCGCGGCA AACCGCAGCC GGTGCCAACG
ACGCGCGACG ATCTCGCATT CCTGCAATAC ACCGGCGGCA CGACCGGCGT CGCGAAAGGC
GCGATGCTCA CGCACGGCAA CCTGATCGCG AACCTGCTGC AGGCCAAGGC GTGGATCGCC
GATCAGGTGT CGGGCGACGT CGAGACCGTG CTGACGCCGC TGCCGCTCTA TCACATCTAT
TCGCTGACGG TGAACGCGTT CATCTTCATG GGGCTCGGCG GGCGCAACAT CCTGATCGCG
AACCCGCGCG ACATGAAGAT GGTGATGAAG ATCATCCGCA ACGAAACGTT TACCGGAATC
ACCGGCATCA ACACGCTGTA CAACGCGTTC CTCGACAACG AGGAATTCCG CAAGCGCGAC
TTCTCGCAGC TCAAGCTCGC GATGGCGGGC GGGATGGCGA TGCAGCGCGC GGTCGCGGAG
CGCTTCCAGC AGGTCACGGG GCGGCCGGTC GTCGAAGGCT ACGGCCTCAC CGAATGCTCA
CCGATCGTCA CGATGAATCC GGTGAACCTG AACGACATGG GCGAATTCAG CGGCTCCATC
GGCCTGCCCG CGCCGTCGAC GCTCGTGCGC TTTCGCCGCG AGGACGGCAC CTGGGCCGCC
GTCGGCGAGC CCGGCGAGCT GTGCGTGCAC GGGCCGCAGG TGATGCGCGG CTACTGGCAG
CGGCCCGACG AGACCGCGAA GGTGATCGAC GCCGACGGCT GGCTCGCCAC CGGCGACATC
GGCGTGATGG ACGAGCGCGG CTTCATCCGC CTCATCGACC GCAAGAAGGA CATGATCCTC
GTGTCGGGCT TCAACGTGTA TCCGAACGAG ATCGAGGAAG TGCTGGTGAC GCATCCGGGC
ATCAGCGAAG CCGCTGCCAT CGGTATCCCG GACGGAGTCC AGGGCGAACG GATCAAGGTC
TTCGTCGTGC GCCGCGACCC GACGCTGACG GTGGACGACG TGCTCGCGCA CTGCCGCAAG
AACCTGACCG GCTACAAGAT GCCGAAGTTC GTCGAGTTCC GCGACGCGCT GCCGCAGACC
AACGTCGGCA AGATCCTGCG CCGCGCGCTG CGCGACGAGG AGCTCGCCAG GATCAAGGCC
GCGAAACAAG GCTGA
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| Protein sequence | MSSSAATATS ELPPNSDGVW YASYPPGVPH EIDVTQYASL VQFFDECTTR FAERVAYVSA
GASMTYRTLA QKVDAFASYL QSIGVKPGDR VAIMLPNTFQ YPVALFGTLK AGAIVVNVNP
LYTARELAHQ LKDSGAQTIV VFENFARTLQ EALPETQVKN IVVTALGDLL ADGFNAKGRL
INFVLKHVKK LVPDYSLPQA IRLRSALALG ARGKPQPVPT TRDDLAFLQY TGGTTGVAKG
AMLTHGNLIA NLLQAKAWIA DQVSGDVETV LTPLPLYHIY SLTVNAFIFM GLGGRNILIA
NPRDMKMVMK IIRNETFTGI TGINTLYNAF LDNEEFRKRD FSQLKLAMAG GMAMQRAVAE
RFQQVTGRPV VEGYGLTECS PIVTMNPVNL NDMGEFSGSI GLPAPSTLVR FRREDGTWAA
VGEPGELCVH GPQVMRGYWQ RPDETAKVID ADGWLATGDI GVMDERGFIR LIDRKKDMIL
VSGFNVYPNE IEEVLVTHPG ISEAAAIGIP DGVQGERIKV FVVRRDPTLT VDDVLAHCRK
NLTGYKMPKF VEFRDALPQT NVGKILRRAL RDEELARIKA AKQG
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