Gene BamMC406_1416 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_1416 
Symbol 
ID6176819 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp1569721 
End bp1570623 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content69% 
IMG OID641681173 
ProductLysR family transcriptional regulator 
Protein accessionYP_001808120 
Protein GI172060468 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.691659 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGTAA CGCTGCGCCA GCTTCGCGTG TTCATCGAGG TAGCGCGGCT CAGGAGCTTC 
AGCCGCGCGG GCGACGAGAT CGGACTCACG CAGTCGGCGG TGAGCCGTTG TGTGCGTGAG
CTCGAGACCG AACTCGGGCT GAAACTGATC GACCGGACGA CGCGCGACGT GCAGTTGACC
GATGTCGGAG CAAACCTGAT CGCGAGCGTG TCCCGCCTGA TCGACGATCT CGACGACACG
CTGCGCGAGA TTCGCGAGAT CGGCGAGCAG CGGCGGGGGC GCGTGATCGT CGCCGCGAGC
CCGACGATCG CGTGCCGGCT GATGCCGCGC GTTGTCGCGT CGTGCGAGCG CCAGTTCCCG
TTCGTCACGC TTGGCTTGCG CGACGACGTG CAGAGCGACG TACTGCGCAA GGTGAAGTCG
AGCGAGGTCG ATTTTGGCGT CGTCATCGGC CCGCTTACCG TGGCCGATCT CGTGTGCGAA
CCGTTGATGA CCGATTCGTT CTGCCTGGTC GCGCGCGCCG ATCATCCGCT TGCGGCGCGG
CCCGAGGTGC CGTGGACGGC ACTCGACGGC GAGCGCCTCG TGCTGCTCGA CCATGCGTCC
GGAAGCCGGC CGCTGATCGA CGCTGCGCTG GCCACCCATC GGGTGAACGC GACGGTCATG
CAGGAACTCG GGCATTCGGC GACGGTATTC GGGCTCGTCG AGGCCGGCGT CGGCGTGAGC
GTGCAGCCGT GGCTGTCGCT GCCGCTGCCG GCAGGATCGA CGCTGGTCGC GCGGCCGCTG
ACGCCGCGTA CCGAGCGCAC CGTCGAGCTG GTGCGCCGCC GCGACCGGTC GCTGTCGCCC
GCCGCGCAGG CGATCTGGGA GCTCGCGCGC CAGATGCCGG CGCGGGCGGA GGACCTCGAC
TGA
 
Protein sequence
MNVTLRQLRV FIEVARLRSF SRAGDEIGLT QSAVSRCVRE LETELGLKLI DRTTRDVQLT 
DVGANLIASV SRLIDDLDDT LREIREIGEQ RRGRVIVAAS PTIACRLMPR VVASCERQFP
FVTLGLRDDV QSDVLRKVKS SEVDFGVVIG PLTVADLVCE PLMTDSFCLV ARADHPLAAR
PEVPWTALDG ERLVLLDHAS GSRPLIDAAL ATHRVNATVM QELGHSATVF GLVEAGVGVS
VQPWLSLPLP AGSTLVARPL TPRTERTVEL VRRRDRSLSP AAQAIWELAR QMPARAEDLD