Gene BamMC406_1400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_1400 
Symbol 
ID6177591 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp1554458 
End bp1554928 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content57% 
IMG OID641681156 
Producttranslation initiation factor IF-3 
Protein accessionYP_001808104 
Protein GI172060452 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0290] Translation initiation factor 3 (IF-3) 
TIGRFAM ID[TIGR00168] translation initiation factor IF-3 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0821028 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGTCTGG TCGGGCTCGA GAACGAACCG CTCGGTATCG TAAAACTCGC TGATGCGTTC 
CGTAAATCGG AAGAACTGGA TGTCGACCTC GTGGAAATCG CGCCGCAAGC GGTTCCTCCG
GTCTGCCGCC TGATGGACTA CGGCAAGTTC AAGTATCAGG AGTCCAAGAA GCAGCACGAA
GCGAAGCTGA AGCAGAAGGT CATCCAGGTG AAGGAAGTCA AATTCCGCCC GGGTACCGAT
GACGGTGACT ACAACGTCAA GCTCCGCAAT CTCGTGCGCT TCCTCGAAGA GGGCGACAAG
ACGAAGATCA CGTTGCGTTT CCGCGGCCGC GAAATGGCTC ACCAAGAGAT CGGCATGCGG
ATGCTGGAAC GTCTGCGCAC GGATCTCGAG GAAGTCGGCC AGGTCGAGCA GATGCCGAAG
ATGGAAGGGC GCCAGATGAT CATGGTGCTC TCGCCGAAGA AAAAGAAGTA A
 
Protein sequence
MRLVGLENEP LGIVKLADAF RKSEELDVDL VEIAPQAVPP VCRLMDYGKF KYQESKKQHE 
AKLKQKVIQV KEVKFRPGTD DGDYNVKLRN LVRFLEEGDK TKITLRFRGR EMAHQEIGMR
MLERLRTDLE EVGQVEQMPK MEGRQMIMVL SPKKKK