Gene BamMC406_1395 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_1395 
Symbol 
ID6175952 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp1547379 
End bp1548284 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content69% 
IMG OID641681150 
ProductLysR family transcriptional regulator 
Protein accessionYP_001808099 
Protein GI172060447 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.465042 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGATCG ACGATCTCCC GGCGCTCGAT ACCTTTGCGA GGATCGTGTC GGCCGGCAGC 
CTGTCGGCGG CGGCGCGCGA ACTCGACCTG TCGCTGTCCG TCGTCAGCAA GCGGCTTGCG
CATCTCGAGT CGCAGCTCGG CGTGCGTCTG CTGCACCGGA CGACGCGGCA GCAGACGCTG
ACCGACGACG GCGCGCAGTT CCACGCGCAG GTGCTGCGCA TCCTGGCCGA AGTCGAGCGC
GCCGAAACGC TGATGAGCGA TCGCCGCGGC ACGGTGGGCG GTGTACTGCG CGTGACGGCG
CCGGGCGAGC TCGGCCGGCT GCGGATCGCG CCGCTCATCG CGGCGTTTCA GCGGCGGCAT
CCCGAACTGA TCGTGCAACT GATGCTGACC GATGCGATCG TCGATCTGCT CGCGCACGAC
ATCGATATCG CCGTGCGGAT CGGCAGCCTC GCCGATTCGA CGATGATCGC GCGCGAGCTG
GCGCCCAATC ATCGTGTGCT TTGCGCGTCG CCGAGCTATG TCGCCGCGCA CGGTTTGCCG
GCTGAACCGG CCGAGCTTCG TGCGCACCGA TGCATCGTGA TGGGCGACCA GCCGCGTGCC
GATTGGCGGT TCGACGGCGC ACACGGCGTG GTTGCGGTCG AGGTGACGGC CGCGCTGCTG
ACGAACGACG GCGGCGCGGC GCGTACGTTG GCGCTGGAGG GCGCGGGCAT CGCGCTGAAG
TCGATCTGGG ACGTCGGTGC CGATCTCGAT GCCGGTCGAC TGGTCCGTGT GCTGCCGGCA
TTCGCGGCGC CCGCGGCGCC GCTTCATGCG GTTTATCCCG GTGGTCGTCA CGTGCCGTTG
CGCGTGCGCG CCTTCGTCGA TTTCCTGCGC GAGCAGTTAC GCGACGCGTG GGGCCGCGCC
GACTGA
 
Protein sequence
MLIDDLPALD TFARIVSAGS LSAAARELDL SLSVVSKRLA HLESQLGVRL LHRTTRQQTL 
TDDGAQFHAQ VLRILAEVER AETLMSDRRG TVGGVLRVTA PGELGRLRIA PLIAAFQRRH
PELIVQLMLT DAIVDLLAHD IDIAVRIGSL ADSTMIAREL APNHRVLCAS PSYVAAHGLP
AEPAELRAHR CIVMGDQPRA DWRFDGAHGV VAVEVTAALL TNDGGAARTL ALEGAGIALK
SIWDVGADLD AGRLVRVLPA FAAPAAPLHA VYPGGRHVPL RVRAFVDFLR EQLRDAWGRA
D