Gene BamMC406_1388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_1388 
Symbol 
ID6176067 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp1542178 
End bp1542609 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content64% 
IMG OID641681143 
Productthioesterase superfamily protein 
Protein accessionYP_001808092 
Protein GI172060440 
COG category[R] General function prediction only 
COG ID[COG0824] Predicted thioesterase 
TIGRFAM ID[TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAAT ATTCCCCCGT ATTTGAAATG TCGATGCCGA TCCGCTGGGG CGACATGGAT 
GCGTTCGGCC ATGTGAACAA CACGGTCTAT TTCCGCTACA TGGAACAAGC GCGGATCTCG
TGGTTCGAGG AACTCGGCAT CGCGGGCGGC AACGGCGAGG GGCAGGGGCC CGTGATCGTC
ACGGCGTCGA TGGAGTTCCT GAAGCAACTG CACTATCCGG GCGACGTGAT CGCGCGGATG
TCGGCCGCGA AGCCGGGCCG CAGCAGCTTC GACACCGGTT TCGAGTTGAC GCGCGCGGAC
GATCCGCAGC ACGTCTATGC ACGCGGCAAC GCGCGCTGCG TGTGGGTCGA CTATGCGCTC
GGCAAGTCGG TGCCGCTGCC GCAACTGCTG CGCGATACGA TCGAGCGCGC GCTCGCCGCG
AAGGTCGGTT GA
 
Protein sequence
MSEYSPVFEM SMPIRWGDMD AFGHVNNTVY FRYMEQARIS WFEELGIAGG NGEGQGPVIV 
TASMEFLKQL HYPGDVIARM SAAKPGRSSF DTGFELTRAD DPQHVYARGN ARCVWVDYAL
GKSVPLPQLL RDTIERALAA KVG