| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1376 |
|---|
| Symbol | |
|---|
| ID | 6177389 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010551 |
|---|
| Strand | - |
|---|
| Start bp | 1528337 |
|---|
| End bp | 1528957 |
|---|
| Gene Length | 621 bp |
|---|
| Protein Length | 206 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641681131 |
|---|
| Product | flavoprotein WrbA |
|---|
| Protein accession | YP_001808080 |
|---|
| Protein GI | 172060428 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0655] Multimeric flavodoxin WrbA |
|---|
| TIGRFAM ID | [TIGR01755] NAD(P)H:quinone oxidoreductase, type IV |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.79766 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGACA TTCTCGTCCT CTATTACAGC CGTCACGGCG CCACGCGCGA TCTCGCGCTC
GCGATCGCGA ACGGCGTCGA CAGCGTGCCC GGCATGCAGG CGCGCATCCG CACCGTGCCG
TCCGTCTCGA CGGTCTGCGA AGCCACTGCC CCCGACATCC CCGCCGACGG CCCGCCGTAC
GCGGAGCTGC GCGATCTCGA GGAATGCGCG GGCCTCGCGC TCGGCTCGCC CACCCGCTTC
GGCAACATGG CCGCCTCCCT CAAGTATTTC CTCGACGGCA CGACCCCGCA ATGGCTGTCG
GGCGCGCTGA CCGGCAAGCC GGCGAGCGTG TTCACGTCGA CCGGCAGCCT GCACGGCGGC
CAGGAATCGA CGCTGCTGTC GATGATGCTA CCGCTGCTGC ATCACGGGAT GATGATCGTC
GGGATCCCGT ACACGGAAGC CGCGCTCAGC ACGACGCGCA CCGGCGGCAC GCCTTACGGC
GCGTCGCACG TGTCGCAGCA CGATCGCAGC GCGGCCGCCG GACTGTCGGC CGACGAAAAG
GCGCTTGCAG CCGCGCTCGG CGTGCGGCTC GCCCGCGCGG CGGCCGCGCT GGCGGCCGCC
CAGCCGACCG ACGCCGCATG A
|
|---|
| Protein sequence | MKDILVLYYS RHGATRDLAL AIANGVDSVP GMQARIRTVP SVSTVCEATA PDIPADGPPY
AELRDLEECA GLALGSPTRF GNMAASLKYF LDGTTPQWLS GALTGKPASV FTSTGSLHGG
QESTLLSMML PLLHHGMMIV GIPYTEAALS TTRTGGTPYG ASHVSQHDRS AAAGLSADEK
ALAAALGVRL ARAAAALAAA QPTDAA
|
|---|
| |