| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1356 |
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| Symbol | |
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| ID | 6177238 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 1503059 |
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| End bp | 1504420 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641681111 |
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| Product | peptidoglycan-binding LysM |
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| Protein accession | YP_001808060 |
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| Protein GI | 172060408 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4254] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.53849 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATCGCGC GAATCACGCA GCGCACGCCG GGCCTGCGCA CGGCGGCACT GCGCGCGGCG
TGTGCGGTCG CGCTTGCGTG CGCGGCACAG CAGGCCGCCG CGCGGCCGCC GGCGGCCGCG
GGCAAGACGA TCGTCTACCG CACGCAAGCC GGCGACACGC TGTACGACGT CGCCGCGCGG
TACCTGCAGG GCCCGGACGA CTGGCAACTG CTGCAGCAGA TCAACGGCGT GCCCGCCCCG
AAGCACCTGC AGCCCGGCAT CGCGCTGAAG CTGCCGGTCG CGCGGCTGCG CAAGGAAAAG
CTGACCGCGC GCGTCGTCGC GGTGCAGGGG GCGGCCGAGC GCACGTCCGG CGACGCCTAC
GCGCCGCTCG CCGACGATGC GACGCTCAAC GAGGGCGACC GCGTGCGTAC CGGCGCGAAC
GGTTTCGTGA CGATCGAGCT CGCCGACGGC ACGCACATGA GCCTGCCGCC CGACAGCCAG
CTCGACCTGA AGACGCTGCG CCGTACCGTG CTGACCGGCA CGCTCGATCG CGAGTTCGAG
CTCACGCGCG GCTCGGTCGA CAGCGAAGTC ACGCATCTGA AGAAACGCGA CGACCGCTTC
CAGATCCGCT CGCCGTCGGT CGTGGCCGGC GTGCGCGGCA CCCGCTTTCG CGTGAACTAC
GATGCGGCCG GCAACGCGAC GACGCGCGTC GAAGTGCTCG ACGGTACCGT CGGCGTCGCC
GGCAAGCGGC AACCGGCCGA CCCGACGCTC GTGCACGCGA ACTTCGGCAG CATCGCGACG
TCGTCCGGCG CGATCGGCGC GCCCGTCCAG CTGCTGCCCG CACCGGCGCT CACGCATCCG
GACAAGGTGC AGGACGAGCC CGACGTCGCG TTCGACATCG CGCCGCTCGC CGCTGCGCAC
GCATATCACC TGCAGCTCGC GCACGACGCG GGCATGCTCG ACCTGTTCCG CGAAACCCGC
ACCGATACGC CGAGCGCGGT GTTTCGCGAC GTGCCGAACG GCACGTATTT CGTGCGGGTC
GCCGCGATCG ACACCAACGG CCTCGAAGGC ATGCCGCGCA CCTATGCGTT CGAGCGGCGC
CAGATGGGGC TCGACGCGAG CGCGTCGCCG GGCGCCGGCG GCTACGAGTT CCGCTGGTCG
CCGAACGGCG CGGGCAAGGA TGCGCGCTAC CGGTTCGTGC TGTCGCGCTC GAAGGACCTG
AGCGCGCCGG TCGTCGACCA GGTCGGCCTG CACGCGCGCA AGATCACCGT CGCGCACCTG
CCGCCCGGCG ACTACTACTG GGCCGTGACG GTCGAGGAGT TCGAAGGCGG CAAGTTCTAT
CAGAAGACGA GTCCGGTCAG CGCGTTCACG TTGTCGCGCT GA
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| Protein sequence | MIARITQRTP GLRTAALRAA CAVALACAAQ QAAARPPAAA GKTIVYRTQA GDTLYDVAAR
YLQGPDDWQL LQQINGVPAP KHLQPGIALK LPVARLRKEK LTARVVAVQG AAERTSGDAY
APLADDATLN EGDRVRTGAN GFVTIELADG THMSLPPDSQ LDLKTLRRTV LTGTLDREFE
LTRGSVDSEV THLKKRDDRF QIRSPSVVAG VRGTRFRVNY DAAGNATTRV EVLDGTVGVA
GKRQPADPTL VHANFGSIAT SSGAIGAPVQ LLPAPALTHP DKVQDEPDVA FDIAPLAAAH
AYHLQLAHDA GMLDLFRETR TDTPSAVFRD VPNGTYFVRV AAIDTNGLEG MPRTYAFERR
QMGLDASASP GAGGYEFRWS PNGAGKDARY RFVLSRSKDL SAPVVDQVGL HARKITVAHL
PPGDYYWAVT VEEFEGGKFY QKTSPVSAFT LSR
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