Gene BamMC406_1315 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_1315 
Symbol 
ID6177797 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp1458065 
End bp1458535 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content69% 
IMG OID641681072 
ProductNUDIX hydrolase 
Protein accessionYP_001808021 
Protein GI172060369 
COG category[L] Replication, recombination and repair
[R] General function prediction only 
COG ID[COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.511776 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0806389 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCGCA GCGGTGCGCC GCGCACGGTA TCGTGCGGCG TCGTGATTCT CGACCGGGCC 
GGCCGTGTAT TCCTCGCGCA TGCGACGGAT ACCACGCACT GGGACATCCC GAAGGGGCAG
GGCGAGCCCG GCGAGTCGCC GGCCGACGCG GCGCTGCGGG AGCTGCGCGA GGAAACCGGC
ATCGAGTTCG CGCCGGCGCG TCTCGTCGAT CTCGGCCGCT TCGCGTACCG CCACGACAAG
GACCTGCACC TGTTCGCGGT GCAGGTCGCC AACGACGAGA TCGATCCCGC GCACTGCACG
TGCACGTCGC TGTTCCCGAG CCGTCGCGAC GGCTCGCTGA TTCCCGAGAT GGACGCGTAT
CGCTGGACGG CACCCGCCGA CGTCGATACG TATGCGAGTC GCAGCCTCGC GCGGCTGTTT
CGGACGACGC TGTCGCTTGC GGATCTGCAC CGGCGGTTGA TGGGCGGGTG A
 
Protein sequence
MKRSGAPRTV SCGVVILDRA GRVFLAHATD TTHWDIPKGQ GEPGESPADA ALRELREETG 
IEFAPARLVD LGRFAYRHDK DLHLFAVQVA NDEIDPAHCT CTSLFPSRRD GSLIPEMDAY
RWTAPADVDT YASRSLARLF RTTLSLADLH RRLMGG