| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1265 |
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| Symbol | |
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| ID | 6177544 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 1398442 |
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| End bp | 1399665 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641681023 |
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| Product | lytic transglycosylase catalytic |
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| Protein accession | YP_001807972 |
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| Protein GI | 172060320 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.254605 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCGTC ATACTGCCCG TTCGCTCAGC CACGCCACGC CGAAGATCGC CGCGACGATC
GCGCTGTCGT GCGCGCTACA CGGAGCCGCG TGGGCCGACT GTCTCGACGA TGCAGCCACG
TTCCAGCACG TGAGCGTGAG CCTGCTGCGC GGCATCGCGC AGGTCGAATC GGGGATGAAT
CCGAACGCGG TCAACACCAA CACGAACGGC ACCGTCGACA TCGGGCTGAT GCAGATCAAC
AGCACGTGGC TGCCGACGCT CGCGCGCGAA GGCATCACGC GGGAAAGCCT GTTCGATGCG
TGCACCAACG CGTACGTCGG CGCGTGGATC CTGTCGCAGA ACATCCGCCA GCTCGGCGCC
AACTGGACCG CGATCGGCGC GTACAACGCC GCGTCGCCCG ACAAGCGCCT CGCGTATGCC
CGCAAGGTCT ATGATGCAAT CCGGACCATG CCGGATTCGC CGGATACTCC CATGCCCATC
CTGCCTCCCT CCTTTACGCC GCCGCAGCAG GTGCAGGCGT ACAACCCGTT CGCGAGCCTG
AGCGTATCCG CGCCGCCGGC CGCGCGGGCC CGCACGCTGT CACCGGCCGC CCCGCCGCCG
CCACCGCAAG GCGGCCCCGC CGGCCCGGCC GGCACGTACA ACTTCGGCTG GACCGTCACG
GGCGCCGACC AGGCCAAGCC GATCCAGGTG TTCGACGACG GCGCGCGGAT CTACGTGCAG
TTCAGCGACA TGAAGCATGT GCCGGCGATC TTCACCGAAA CGTCGTCGGG CCGCGTGCTG
ATGTCGTGGG AGCTGCAATT CCCGTATGCC GTTCTGACGC GCCCCGCGCA AACGTTGATC
TTCCAGCTCG GGCCGTTCGA GGCGCGCGCG CAGCGCGGCG CGGCGGGCGC AACGACGCAG
GCAGGGGCTG GAACCGCGGC GGGAGCGCCA CGTTCTGGGG CGACGACGGC TGCCACGACG
TCTGCGGGGA AACCGCACGC GAATGCATCG GCCAAGCGCA CGGCGTCGGC CGACGCGCTG
TGGTATCTGA ACACGCCGTC GACGTCTGGC TCGGCAGCGA CGGCGAACAC GGCAAATACC
GCGCCGGCGT CAACCTCGTC GCCTTCGTCG AACACGCCGG CCACGTGGCC CACCGCGGTG
ACGTCGAACA CGCCGCCGGC CGCCACACCT CAGGCGCCGG CCGCGCGCGT CAGCACCGAC
GCGCTCTGGT ATATCTCGAA GTAA
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| Protein sequence | MPRHTARSLS HATPKIAATI ALSCALHGAA WADCLDDAAT FQHVSVSLLR GIAQVESGMN
PNAVNTNTNG TVDIGLMQIN STWLPTLARE GITRESLFDA CTNAYVGAWI LSQNIRQLGA
NWTAIGAYNA ASPDKRLAYA RKVYDAIRTM PDSPDTPMPI LPPSFTPPQQ VQAYNPFASL
SVSAPPAARA RTLSPAAPPP PPQGGPAGPA GTYNFGWTVT GADQAKPIQV FDDGARIYVQ
FSDMKHVPAI FTETSSGRVL MSWELQFPYA VLTRPAQTLI FQLGPFEARA QRGAAGATTQ
AGAGTAAGAP RSGATTAATT SAGKPHANAS AKRTASADAL WYLNTPSTSG SAATANTANT
APASTSSPSS NTPATWPTAV TSNTPPAATP QAPAARVSTD ALWYISK
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