Gene BamMC406_1255 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_1255 
Symbol 
ID6177490 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp1387329 
End bp1388033 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content66% 
IMG OID641681013 
ProductGntR domain-containing protein 
Protein accessionYP_001807962 
Protein GI172060310 
COG category[K] Transcription 
COG ID[COG2186] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCAGA CAGAACCAAA GCGGCTTTAC CAATCCGTGG CCGCGCAAAT CCTCGCATTG 
ATCCGTCAGG GTGGAATTCC TGCTGGTGGG CGACTGCCGC CCGAGCGCGA GCTCGCGACC
ACGCTCGGCG TCTCGCGCCC GTCGTTGCGC GAGGCCTTGA TCGCCCTCGA AATCGGCGGG
CAGATCGAGA TACGTCTTGG CTCGGGGGTC TACGTTCGCG ATCCTGGCGA GAGTGACGGG
GGCGGCGTGC CCGCGTTGGG AGAGAGCCCA TCGGAGTTGA TGCAGGCGCG CGGTGCCATA
GAGGGTTCGG TGGTTGTGCT GGCCACCGCG CGATTCTCGG CAGCTACGCT GGACCGTTTG
CGTCGCACGG TGGAGCGCAT GAAGCGGCTC GCCGTCGCGG GCAAATCGCC CGTCGACGCG
GACCGGCAGT TTCATATGCT CATTGCGGAG GTGGCAGGCA ACTCCGTGTT GAGCCGCTTC
GTGGGCGAGT TGTTCGATAG CCGACACGAC CCGATTGCCG CCGCGATTCG CGGACATTCG
GAAAGCCCGG AAACCTGGGC CGCCGCGGTG CGCGAGCACG AGCAGATCCT GAAGGCGTTG
CAAGCGGGCG ATCCGATCGC TGCGCAAACC GCGATGCGCG CCCATCTGCA GGCGTCGGAG
GAGCGCTGGA TCGGCGGCGC ATTGCAGCAC GGGATTGCGC CCTGA
 
Protein sequence
MKQTEPKRLY QSVAAQILAL IRQGGIPAGG RLPPERELAT TLGVSRPSLR EALIALEIGG 
QIEIRLGSGV YVRDPGESDG GGVPALGESP SELMQARGAI EGSVVVLATA RFSAATLDRL
RRTVERMKRL AVAGKSPVDA DRQFHMLIAE VAGNSVLSRF VGELFDSRHD PIAAAIRGHS
ESPETWAAAV REHEQILKAL QAGDPIAAQT AMRAHLQASE ERWIGGALQH GIAP