| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1235 |
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| Symbol | |
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| ID | 6178201 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 1366227 |
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| End bp | 1369196 |
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| Gene Length | 2970 bp |
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| Protein Length | 989 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641680993 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_001807942 |
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| Protein GI | 172060290 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.172784 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAGCG CGCAGATCTT GATCGTCGAG GATGACCGCA TCGTCGCACG CGATATCGCG
CAACAGATGA GCCGCGCGGG CTATGTCGTG GTCGGCAGCA CGGGTAGCGG CGAAGAAGCG
CTCGCGCTGG TCGAGACGCT GCCCGCAGGC AGCAAGCCGG ATCTGGTGCT GATGGACGTG
CGGCTCGAGG GCGAACTGGA CGGCATCGAC ACCGCGCGGT GTATCCGCGA AGCGCGCGAC
ATTCCCGTCG TGTTTCTCAC CGCCTACGCG GACGAAGAGA CGATCCGCCG CGCGACGGCA
GCGGAACCGT ACGGCTACGT GCTCAAGCCA TTCGACGACA TGCAATTGCG TACCGTCGTC
GAAATGGCGC TTTACAAGCA CGGCGCCGAG CGGCGTTTGC GCGAGAGCGA GCAGCGCTAT
GCGATCACGC TGTCGAGTAT CGGCGACGGT GTGCTGTCGA CGGATGTGGA TGGCTTCGTC
ACCTTCGTCA ATCTCGCCGG CGAAGCGCTG ACGGGCTGGT CGCGCAGCGA AGCGACGGGA
CGGCGGCTGG GCGAGGTCTT CAGTCTGCAC GATGAGAACA CGCACGCACC GATCGAGGAT
CCGATGGCCG CCGTGCTGCA AACCGGGAGC GACGGCGGGC TGCCGGCGCG CGCCATTCTG
CGCGCGCGCG GCGGCAGCGA CCTGCCGGTC GAATGCACGG GCACGCCGAT GACGGACGAA
CGCGGCGTGC GGCAGGGCAT CGTGATTGTG TTTCGCGACG TGACGCAAAA GCGCCGCGCG
CAGGAAGCGG AAATTCTTCG TGAGACCAAT GCGCGACTCG AAATGGCGAT GTACGGCTCG
AATGTCGGCG TGTGGGAAAT CGACATGCCC GAAGGCGATC ACAAGCGCGG CTTCGCTCGC
TATTCGAACA TCTACGAGTG GCTCGGCTTC GACACGCCGC AAGCGCGCCT CGATTACGAA
GCGTACATGA GCGTGCTGCA TCCCGATCAT CGCGACAGCA CGGATCGCGC GGTCGCATCG
TTCCTCGAAA GCGGCGATGG CCTGTTCGAG CTGGAGAACC GGCTGCGGCA TCGCGACGGC
ACCGACCGCT GGGTGCTGGT GCGCGGCACC GCGCGCCGCG ACGCGATGGG CAAGCCGGTG
CGCTTCGTCG GCAGTCTGGT CGACATCACG GAACTGAAAA TGACCGAGCA GGCGCTGCGC
GCGAGCGAGG AGCGCTTTCG CGGCACCTTC GAAAACGCCG CGGTCGGCGT CGCGCATTGC
GATCTCGATG GGCGCTTTCT GCGTGTGAAT CATCGGTCGG GCGAGATCGT CGGCTGGCCG
CGGGACGCGT TGCAGCACCG ACGGCTTCAC GATCTGATTC ATGCCGATTT CAGCGTGGCG
AGCATTGAGC GGTTCCGCCT GCTGACGGAA GGCAAGCTCA AGCATTATTC GGAGGAAGTG
CCGCTCGTCA GGTTCGACGG GGAGCGCGTG TGGGTAACGC TGTCGGTTGC GCTTCAGCAC
GACGCGTCAG GTCAGACGGC TCACGTCATC GTCATCATTC AGGACATCTC CGAGCGCAAG
GCGCTGGAAG AAACGGTGCG CGTCGCGAAG GATGCGGCGG AAGCGGCCAG CCGCGCGAAG
GACCAGTTCC TCGCCAACAT CAGCCATGAG CTGCGCACGC CGCTCAACGG CATTCTCGGC
TATGCGCAGA TACTCCAGCG TGACGTGCGG CTCGACACGC GCCAGCTGGC GAGCGTCGGC
GTGATCGAGC AGAGCGGGCA GCATCTGCTG ACGCTGATCA ACGATATTCT CGACTTCGCA
CGTCTGGGCG CCGGCAAGCT GGAACTGCAG GTCGGCGAAG TGCCGCTGCG CGGGTTTCTC
GAGACGATCG CGGAAATCGT CGCCGTGCGC GCGCAGCAAA AGCGCCTCGT GCTGAACTAT
GTGGCGGCGC CGGATCTGCC TGCCGTGGTC CGTGTCGATG AGCGCCGGCT ACGCCAGGTG
CTGCTTAATC TGCTCGCGAA TGCGGTCCAG TTCACCGACC GCGGCGAGGT CACGCTGTCG
GTCAGCCGAG GCGCGGCCGG GCGCCTGCGC TTCGAGGTGC GCGATACCGG TATCGGCGTG
AGCGCCGACC GGCTGGAAGC GATCTTTCAA CCGTTCGAAC AGGCGGGCGA TCACACGCGA
CGCAGCGGCG GCGCGGGGCT GGGTCTCGCG ATCAGCCAGC AACTCGTGCG CATGATGGGC
GGCGAGATCG AAGTCACGAG TTCGGCCGGA GAGGGCAGCG TGTTCGGTTT TGAACTGGAT
GCGCCCGCGT CGGCGGCGTG GCCGTGCGAG CGCATACCGC GTCTCCAGGC GGACCGCCTT
GATGGCGCGC GCCGCGTCAT TCTGGTGGTC GACGATGTCC CCGCGAACCG CACGCTTCTG
GCGGAAGTGC TGGGACAGGC GGGCTTTCGG GTGATCGAAA GCAGCGATGG GCGCGATGCG
CTCGACAAGG CTGCAGCGTG CGCGCCCGAC CTGATCGTTC TCGACACGGT GATGCCCGTG
ATGGGCGGCA TAGAGACGCT GCGCCATCTG CGCCGTTCGC AAACATTGGG AGCGACGCCC
GTGATCGTCG TATCCGCCGA CGCTTCCGAA CAGAACGCAC GCGCGAACAT CGACGCGGGC
GCAAACGTGT TTCTGGAAAA GCCGCTCAAT CTCGACCGCC TGTTGGGCTC GATCGCAATG
CTGCTCGGCC TGGTGACACT GCAGGGAGCC GGCCCGGCCT GCGAAGCTAA CCGGCCGATG
ATCATCCCGC CGCGTGAGGA CATGGCGGCG CTGCACCGCT ATGCACTGCT CGGCTCGATG
CGCGACATCA GCCGGCACGC CGATCGTCTT GCGAGTTCGC ATGAAAAGTA TGAACCGTTC
GCCGCGCGTT TGCGGCACCT TGCCATGACC TACGAATCGC AGGCCCTGCT TTCGTTGATC
GAACATCATC TGAACAACGA AGGGAATTGA
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| Protein sequence | MTSAQILIVE DDRIVARDIA QQMSRAGYVV VGSTGSGEEA LALVETLPAG SKPDLVLMDV
RLEGELDGID TARCIREARD IPVVFLTAYA DEETIRRATA AEPYGYVLKP FDDMQLRTVV
EMALYKHGAE RRLRESEQRY AITLSSIGDG VLSTDVDGFV TFVNLAGEAL TGWSRSEATG
RRLGEVFSLH DENTHAPIED PMAAVLQTGS DGGLPARAIL RARGGSDLPV ECTGTPMTDE
RGVRQGIVIV FRDVTQKRRA QEAEILRETN ARLEMAMYGS NVGVWEIDMP EGDHKRGFAR
YSNIYEWLGF DTPQARLDYE AYMSVLHPDH RDSTDRAVAS FLESGDGLFE LENRLRHRDG
TDRWVLVRGT ARRDAMGKPV RFVGSLVDIT ELKMTEQALR ASEERFRGTF ENAAVGVAHC
DLDGRFLRVN HRSGEIVGWP RDALQHRRLH DLIHADFSVA SIERFRLLTE GKLKHYSEEV
PLVRFDGERV WVTLSVALQH DASGQTAHVI VIIQDISERK ALEETVRVAK DAAEAASRAK
DQFLANISHE LRTPLNGILG YAQILQRDVR LDTRQLASVG VIEQSGQHLL TLINDILDFA
RLGAGKLELQ VGEVPLRGFL ETIAEIVAVR AQQKRLVLNY VAAPDLPAVV RVDERRLRQV
LLNLLANAVQ FTDRGEVTLS VSRGAAGRLR FEVRDTGIGV SADRLEAIFQ PFEQAGDHTR
RSGGAGLGLA ISQQLVRMMG GEIEVTSSAG EGSVFGFELD APASAAWPCE RIPRLQADRL
DGARRVILVV DDVPANRTLL AEVLGQAGFR VIESSDGRDA LDKAAACAPD LIVLDTVMPV
MGGIETLRHL RRSQTLGATP VIVVSADASE QNARANIDAG ANVFLEKPLN LDRLLGSIAM
LLGLVTLQGA GPACEANRPM IIPPREDMAA LHRYALLGSM RDISRHADRL ASSHEKYEPF
AARLRHLAMT YESQALLSLI EHHLNNEGN
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