Gene BamMC406_1160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_1160 
Symbol 
ID6177379 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp1284594 
End bp1284908 
Gene Length315 bp 
Protein Length104 aa 
Translation table11 
GC content72% 
IMG OID641680916 
Productmalonate decarboxylase subunit delta 
Protein accessionYP_001807867 
Protein GI172060215 
COG category 
COG ID 
TIGRFAM ID[TIGR03130] malonate decarboxylase acyl carrier protein 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.965785 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.221003 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACAGT TGAACTACCG CTTCACCGCG CGCGAGCGCG CGCAGGGCGA ACGGGCCGCG 
GCGCTCGTCG GCGTGGTCGC GTCCGGCAAT CTGGAGGTGC TCGTCGAGCG CGTGCTGCCG
GGCAATGAAT GCGAGATCGA CATCCGCACC GCGGCGGTCG GTTTCGGCGC GGTGTGGCAG
GCCGTCGTGT CGGACTTCGT CGAACGGCGC GCGCCGGGCG GCCTGAAGCT GTCGATCAAC
GACGGCGGCG CGCGGCCCGA CATGGTCTCG CTGCGGCTCG CGCAGGCCGT GCGCGCGATC
GAGGGGGACG CATGA
 
Protein sequence
MEQLNYRFTA RERAQGERAA ALVGVVASGN LEVLVERVLP GNECEIDIRT AAVGFGAVWQ 
AVVSDFVERR APGGLKLSIN DGGARPDMVS LRLAQAVRAI EGDA