| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1134 |
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| Symbol | |
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| ID | 6177796 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 1256192 |
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| End bp | 1257424 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641680890 |
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| Product | 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) |
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| Protein accession | YP_001807841 |
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| Protein GI | 172060189 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1071] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.878199 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.62843 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCTGT CAGAGCCATT GCGTCTGCAT GTGCCGGAGC CCACCGGGCG TCCGGGCTGC
AAGACGGATT TTTCCTATCT GCATCTATCG CCGGCCGGCG CGGTTCGTCG CCCGCCGATC
GACGTTGCTC CCGCGGACAC CGCCCATCTC GCCCGCAGCC TCGTGCGCGT GCTCGACGAC
CACGGCGCGG CCCTCGGCCC ATGGGCGCCG GACCTCGACG ATGCGCGCCT GATCGCCGGG
ATGCGCGCGA TGCTGAAGAC GCGCATCTTC GACGCGCGCA TGATGATCGC GCAGCGTCAG
AAGAAAATCT CCTTCTACAT GGTGAGCCTC GGCGAAGAGG CGATCGGCGC CGCGCACGCG
ATGGCGCTGC GTCACGGCGA CATGTGCTTC CCGACCTATC GCCAGCAAAG CATCCTGATC
GCGCGCGACG TGCCGCTCGA ACGGATGATC TGCCAGTTGA TGTCGAACGA AGGCGACCCG
CTGAAGGGGC GCCAGCTTCC GGTGATGTAC TCGGACCGCG AAGCCGGCTT CTTCTCGATC
TCCGGCAATC TCGCGACGCA GTTCATCCAG GCGGTCGGCT GGGCGATGGC GTCGGCGATC
AAGGGCGACA CGAAGATCGC GTCCGCTTGG ATCGGCGACG GCGCGACCGC GGAAGCCGAC
TTCCACACCG CGCTGACGTT CGCGCACGTG TATCGCGCGC CGGTCGTGCT GAACGTCGTC
AACAACCAGT GGGCGATCTC GACGTTCCAG GCGATCGCGG GCGGCGAGGG TACCACCTTC
GCCGGGCGCG GCGTCGGCTG CGGCATCGCT TCGCTGCGCG TCGACGGCAA CGACTTCCTC
GCGATCTACG CGGCATCGAC CTGGGCCGCG GAACGCGCGC GCCGCAATCT CGGCCCGACG
CTGATCGAAT GGGTCACCTA CCGCGCGGGC GCGCATTCGA CGTCCGACGA TCCGACGAAA
TACCGGCCGG CCGACGACTG GGCCCATTTC CCGCTCGGCG ATCCGATCGC GCGCTTCAAG
CAGCATCTGA TCGCGAAAGG CATCTGGTCG GACAGCGCGC ACGATGCACT CACGGCCGAG
CTGGAAGCCG AAGTGATCGC CGCGCAGAAG GAAGCGGAGA AGTTCGGCAC GCTGGCCGAC
GACCGGATTC CGTCGCCGGC CTCGATGTTC GACGACGTGT ACAAGGAGCT GCCCGCGCAC
CTGCGCCGTC AGCGCCAGGA ACTGGGAGCG TGA
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| Protein sequence | MSLSEPLRLH VPEPTGRPGC KTDFSYLHLS PAGAVRRPPI DVAPADTAHL ARSLVRVLDD
HGAALGPWAP DLDDARLIAG MRAMLKTRIF DARMMIAQRQ KKISFYMVSL GEEAIGAAHA
MALRHGDMCF PTYRQQSILI ARDVPLERMI CQLMSNEGDP LKGRQLPVMY SDREAGFFSI
SGNLATQFIQ AVGWAMASAI KGDTKIASAW IGDGATAEAD FHTALTFAHV YRAPVVLNVV
NNQWAISTFQ AIAGGEGTTF AGRGVGCGIA SLRVDGNDFL AIYAASTWAA ERARRNLGPT
LIEWVTYRAG AHSTSDDPTK YRPADDWAHF PLGDPIARFK QHLIAKGIWS DSAHDALTAE
LEAEVIAAQK EAEKFGTLAD DRIPSPASMF DDVYKELPAH LRRQRQELGA
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