| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1111 |
|---|
| Symbol | |
|---|
| ID | 6177702 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010551 |
|---|
| Strand | - |
|---|
| Start bp | 1225302 |
|---|
| End bp | 1226501 |
|---|
| Gene Length | 1200 bp |
|---|
| Protein Length | 399 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641680867 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_001807818 |
|---|
| Protein GI | 172060166 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGCCG CCTCCACCGA CCGTCCGACC GACGCCGCCT CGCCCCACTA CTCGCGCAGC
CTGCTGTTGC TGCTCGCGAC GATCGCGGGC GTGTCGGTCG CGAACATCTA CTACAACCAG
CCGCTGCTCG ACAGCTTCCG CTCGGCCTTT CCCGACAGCG CGTCGTGGAT CGGCGCGGTG
CCGACCGCGA CCCAGCTCGG CTATGCGGCC GGCATGTTCC TGCTCGCACC GCTCGGCGAC
CGTTTCGATC GCCGCGGGCT GATCCTGCTG CAGATCGCGG GCCTGTCGAT CGCGCTGATC
GTGGCCGCGG CCGCGCCATC GCTGGCGGTG CTCGCCGCGG CGAGCCTGGC GATCGGCGTG
CTCGCGACGA TCGCGCAGCA GGCCGTGCCG TTCGCGGCCG AGATCGCGCC GCCCGCCGAG
CGCGGGCATG CAGTCGGCAC CGTGATGAGC GGCCTGCTGC TCGGCATCCT GCTGGCGCGC
ACGGCGGCCG GCTTCGTCGC CGAATATTTC GGCTGGCGGG CGGTATTCGG TGCATCGGTC
GCAGCGCTCG CCGCGCTGGC CGCGGTGATC GTGCTGCGGC TGCCGCGCAG TTCGCCGACG
TCGACGCTGT CGTACGGCAA GTTGCTCGGC TCGATGTGGC ATCTGGCGGT CGAACTGCGC
GGGCTGCGCG AGGCGTCGCT GACGGGCGCC GCGCTGTTCG CCGCGTTCAG CGCGTTCTGG
CCGGTGCTCA CGCTGCTGCT CGCCGGCGCG CCGTTCCATC TCGGCCCGCA GGCCGCCGGG
CTGTTCGGCA TCGTCGGCGC GGCCGGTGCG CTGGCCGCGC CTTACGCGGG CCGTTTCGCC
GACAAGCGCG GCCCGCGCGC GATCATCTCG CTCGCGATCG CGCTGCTCGC GGCGTCGTTC
GTGATTTTTG CGCTGTCGGG GACGAGCCTC GTCGGGCTCG TGATCGGCGT GATCGTGCTG
GATGTCGGGG TGCAGGCCGC GCAGATCTCG AACCAGTCGC GCATCTACGC GCTAAAGCCC
GACGCGCGCA GTCGCGTGAA CACCGTGTAC ATGGTGTGCT ACTTCATCGG CGGCGCGCTC
GGCTCGTCGG TCGGCGTCGC CGCATGGCAT GCATTCGGCT GGATCGGCAT GTGCGCGGCC
GGCCTGCTGT TTACCGCACT CGCCGGCTGG TTCCACCATC GCGGCGCACA GCGCGCCTGA
|
|---|
| Protein sequence | MSAASTDRPT DAASPHYSRS LLLLLATIAG VSVANIYYNQ PLLDSFRSAF PDSASWIGAV
PTATQLGYAA GMFLLAPLGD RFDRRGLILL QIAGLSIALI VAAAAPSLAV LAAASLAIGV
LATIAQQAVP FAAEIAPPAE RGHAVGTVMS GLLLGILLAR TAAGFVAEYF GWRAVFGASV
AALAALAAVI VLRLPRSSPT STLSYGKLLG SMWHLAVELR GLREASLTGA ALFAAFSAFW
PVLTLLLAGA PFHLGPQAAG LFGIVGAAGA LAAPYAGRFA DKRGPRAIIS LAIALLAASF
VIFALSGTSL VGLVIGVIVL DVGVQAAQIS NQSRIYALKP DARSRVNTVY MVCYFIGGAL
GSSVGVAAWH AFGWIGMCAA GLLFTALAGW FHHRGAQRA
|
|---|
| |