Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_1110 |
Symbol | |
ID | 6176738 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 1224102 |
End bp | 1225280 |
Gene Length | 1179 bp |
Protein Length | 392 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641680866 |
Product | hypothetical protein |
Protein accession | YP_001807817 |
Protein GI | 172060165 |
COG category | [E] Amino acid transport and metabolism [G] Carbohydrate transport and metabolism [R] General function prediction only |
COG ID | [COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACCGC TCGACCGCCT CCTCGATTTC CTCGCCCGCC TGCCGTTCCG GATCCGTCTG CCGCAAAGCC GCGGCGGCCG TGTCGCGCTG GCGCTGGTAT TCATCTATTT CGTCTGGGGT TCGACCTACA GCGGCCTGCA TTTCGCGCTG CAGTCGTTTC CGCCGCTGCT GCTCTCGGGG CTGCGCAACC TGCTCGGCGG GATCGGCCTG TTCATCTTCG CGCTGCGGCG CAAGCCCGAA TGGCCGACGC TGCTGGAAAT CCGCAACTCG GCGATCGTCG GCACGATGCT GGTCGCGCTG TCGTCCGGCA CGATCGCGCT CGGGATGCGC ACGGTCAGCA GCGGCTCGGC CGCGGTGATG GTCGCCACGG TGCCGCTGTT CGCGACCGTG ATCGCGGCGG TCGCCGGGCG CCCGGTGACG AAGGGCGAGT GGTCGGCCGT CGCGCTCGGG ATGGTCGGCA TCGTCGTGCT GAATTCGGGC GGTGCGGCCG CCGCAAACTC CGCGCTCGGC ACGATCAGCG TGCTGGCCGG CGCGCTGTTC TGGGCGGGCG GCGCGCATCT GTCGACGCGG CTCAAGCTGC CGTCGGACCT GTTCCTGTCC ACGTCGCTGC AGATCGGTCT CGGCGGGCTG ATGTCCACGC TGGCCGCGTG GCTGCTCGGC GAGCGCATCG AGCAGGTCGC GGCGGCGCCG GTGTTCGCGT TCCTGTACCT GATGGTGTTC TGCACGATGG CGGCGTACGT CGCGTACGGC TACCTGATTC GCCACACGAG CCCGATCATC GCGAGCAGCT GCATGTACGT GAACCCGATC GTCGCGGTCG CGCTCGGCGC GCTGATGCTC GGCGAGCCCG TGACGATGGC GACCGTGATC GCGACGGTCG CGATTCTCGG CAGCGTCGGG CTGTCGTTCC TGTTCGATCC CGCGCGCCGT CCCGCGGCGC GCGCGGTGGT CGACGTTTCG CCGGCCGTGG CGACCGGCTC GGCGGCGGCG CATGCGCCGG CACCCGCACC GGATCAGGCC GCGGTGCCGG ATTCGGCGCC GATCCTCACG CCTTCCGCGA TACCGCTTGC GGTGCCGACC CCGGCCGCCG TCGTGGACCC GGCCGCGGTC ATGGATCCCG CGCAGGCATT CACGCCGCCA CCCGCCGACG AACCGGCCGA GTCGCGCGCC CGCGCGTGA
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Protein sequence | MTPLDRLLDF LARLPFRIRL PQSRGGRVAL ALVFIYFVWG STYSGLHFAL QSFPPLLLSG LRNLLGGIGL FIFALRRKPE WPTLLEIRNS AIVGTMLVAL SSGTIALGMR TVSSGSAAVM VATVPLFATV IAAVAGRPVT KGEWSAVALG MVGIVVLNSG GAAAANSALG TISVLAGALF WAGGAHLSTR LKLPSDLFLS TSLQIGLGGL MSTLAAWLLG ERIEQVAAAP VFAFLYLMVF CTMAAYVAYG YLIRHTSPII ASSCMYVNPI VAVALGALML GEPVTMATVI ATVAILGSVG LSFLFDPARR PAARAVVDVS PAVATGSAAA HAPAPAPDQA AVPDSAPILT PSAIPLAVPT PAAVVDPAAV MDPAQAFTPP PADEPAESRA RA
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