| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1045 |
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| Symbol | |
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| ID | 6176481 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 1135860 |
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| End bp | 1137212 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641680801 |
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| Product | glucarate dehydratase |
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| Protein accession | YP_001807752 |
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| Protein GI | 172060100 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
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| TIGRFAM ID | [TIGR03247] glucarate dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.567238 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCCG TCACTGCCTC GCCTTCCCAC GACACGCCGC GCATCGTCGA GCTGCAAGCC
ATTCCGGTCG CCGGCCACGA CAGCATGCTG CTCAACCTGA GCGGCGCGCA CGGTCCGTTC
TTCACCCGCA ACCTCGTGAT CCTGAAGGAC AGCGCGGGCC GGACCGGCGT CGGCGAAGTG
CCGGGCGGCG AAAGCATCCG CCGCACGCTC GAAGATGCGC GCGCGCTCGT CGTCGGCCAG
CCGGTCGGCA ACTACCACGC GGTGCTCAAC GACGTGCGGC GCACCTTTGC CGATCGCGAC
GTGAGCGGCC GCGGCCTGCA GACCTTCGAC CTGCGCACCA CGATCCACGC GGTCACCGCG
CTCGAAGCCG CGCTGCTCGA CCTGCTCGGC CAGCATCTCG GCGTACCCGT GGCCGCGCTG
CTCGGCGAAG GACAGCAGCG CGAGCGCGTC GAGATGCTCG GCTACCTGTT CTACGTCGGC
GATCGCAGCA AGACCGCGCT GCCCTATCGC GACGGCCGCG GCGCGACCGA CGACTGGACC
CGCGTGCGCG ACGAGGCCGC GCTGACGCCC GAGGCGGTCG TGCGCCTCGC CGAAGCCGCG
CACGCGCGCT ACGGATTCAA CGACTTCAAG CTGAAGGGCG GCGTGTTCGA AGGCGCGCGC
GAGGTCGAAG CCGTGACGGC GCTGGCCGAG CGTTTCCCCG AAGCGCGCGT GACGCTCGAT
CCGAACGGCG CGTGGTCGCT CGACGAGGCC GTGCGGCTGT GCCGCGACCT GCACCACGTG
CTCGCCTATG CGGAAGATCC GTGCGGCGCG GAGAACGGCT ACTCGGGCCG CGAGGTGATG
GCCGAATTCC GCCGCTCGAC CGGGCTGCCG ACGGCCACCA ACATGATCGC GACCGACTGG
CGCCAGATGG GCCACGCGGT GCAGCTGCAC GCCGTCGACA TCCCGCTCGC CGACCCGCAC
TTCTGGACGA TGCAGGGCTC GGTGCGCGTC GCGCAGATGT GCCGCGACTG GGGCCTCACG
TGGGGTTCGC ATTCGAACAA CCACTTCGAC GTGTCGCTCG CGATGTTCAC GCACGTCGCG
GCCGCGGCGC CCGGGCAAGT CACCGCGATC GACACGCACT GGATCTGGCA GGACGGCGAA
CGGCTCACGC GCGAACCGCT GAAGATCGAG AACGGGCTCG TGGAAGTGCC GAAGCGGCCG
GGCCTCGGCC TCGACATCGA CATGGATGCG GTCGCGGTCG CGCACGAGCT GTACAAGCAG
CACGGGCTCG GCGCGCGCGA CGATGCGGCG GCGATGCAGT ATCTGATTCC GGGTTGGACG
TTCAACAACA AGCGCCCCTG CCTCGTGCGC TGA
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| Protein sequence | MNAVTASPSH DTPRIVELQA IPVAGHDSML LNLSGAHGPF FTRNLVILKD SAGRTGVGEV
PGGESIRRTL EDARALVVGQ PVGNYHAVLN DVRRTFADRD VSGRGLQTFD LRTTIHAVTA
LEAALLDLLG QHLGVPVAAL LGEGQQRERV EMLGYLFYVG DRSKTALPYR DGRGATDDWT
RVRDEAALTP EAVVRLAEAA HARYGFNDFK LKGGVFEGAR EVEAVTALAE RFPEARVTLD
PNGAWSLDEA VRLCRDLHHV LAYAEDPCGA ENGYSGREVM AEFRRSTGLP TATNMIATDW
RQMGHAVQLH AVDIPLADPH FWTMQGSVRV AQMCRDWGLT WGSHSNNHFD VSLAMFTHVA
AAAPGQVTAI DTHWIWQDGE RLTREPLKIE NGLVEVPKRP GLGLDIDMDA VAVAHELYKQ
HGLGARDDAA AMQYLIPGWT FNNKRPCLVR
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