| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1040 |
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| Symbol | |
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| ID | 6176852 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 1129198 |
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| End bp | 1130577 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641680796 |
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| Product | alpha,alpha-trehalose-phosphate synthase (UDP-forming) |
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| Protein accession | YP_001807747 |
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| Protein GI | 172060095 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0380] Trehalose-6-phosphate synthase |
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| TIGRFAM ID | [TIGR02400] alpha,alpha-trehalose-phosphate synthase [UDP-forming] |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.285696 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCGAC TCATCATCGT TTCAAACCGC GTCGCGCCGA TTTCGGAAGG CGAACCGGCG
GCGGGTGGCC TCGCGATCGG CGTCTACGAC GCGCTGAAGG AGACGGGCGG CATGTGGTTC
GGCTGGAGCG GCGAAGTGGT CGCATCCGGT GCGCCGCAGA TCCGCATCGA GGAGCGCGGC
CCCGTGACGT TCGCGACCGT CGGGCTGTCG CGCCGCGATT ACGACCAGTA CTACCGCGGT
TTCTCGAACG CGACGCTGTG GCCCGCGTTC CATTACCGCG CCGACCTGAT CCAGTACGAC
CGCCACGAGT TTGACGGCTA CCGCCGCGTG AACGTGTGGC TCGCGCAGCA GCTCGTGCCG
CTGCTGCAGG ACGACGACGT GATCTGGGTG CACGACTATC ACCTGATCCC GTTCGCGCGT
GCGCTGCGTG AGGCCGGCGT GAAGAACCGC ATCGGCTTTT TCCTGCACAT TCCGTTTCCG
GCCGCGCAGG TGCTCGTCAA CGTGCCGCCG CATCGCGAGC TCGTCGAGTC GCTGTGCGCG
TTCGATTTGC TCGGCTTCCA GACCGAGCCC GACCTGCGCG CGTTCTGCGA CTACATCGAG
TTCGAGGCGG GCGGCGAAGT CGCGCGGGGA GGGCACACGG TGCGCGTGAA CGCGTTCGGC
AACACGCTGC GCGCGGCCGC CTATCCGATC GGCGTGTATC CGGACGAGAT CGCGTCGCTC
GCGCAGGCGG CCGAGAACGG CAAGGCCGTG CGCACGCTGG CGACGTCGCT GCGCGGGCGC
CAGTTGATCA TGAGCGTCGA CCGGCTCGAT TATTCGAAGG GGCTCGTCGA GCGGTTCCGT
GCGTTCGAGA AGCTGCTGGA GCACCAGACG TCGATTCGCA ATCGCGTGTC GTTCCTGCAG
ATCGCGCCGT CGACGCGCGC CGACCTGCGC GCGTACCAGG ACATCCGCCT GCAGCTCGAA
GCGGAGTCGG GGCGCATCAA CGGCCGCTAC GCGGAGCTCG ACTGGGCGCC GATCCTCTAC
ATTCACCGCC AGTACGACCG GCAGGTGCTG GCTGCGCTGT ACCGGCTGGC GCGCGTGGGT
TTCGTCACGC CGTTGCGCGA CGGCATGAAC CTCGTCGCGA AGGAGTACGT GTCCGCGCAG
AACCCGGACG ATCCGGGCGT GCTGGTGCTG TCGCGCTTCG CGGGGGCCGC GCGCGAGCTG
ACGGGCGCGT TGATCGTCAA TCCGATCGAC ATCGACGGGA TGGCCGATGC GCTGTCGCAG
GCGCTGACGA TGCCGCTCGC CGAGCGGCGC GCGCGCTATG CGGACATGAT CGCGCAGCTG
CGCGAGAACA ACGTGTCGGT GTGGCGCGAC AACTTCCTGC GCGACCTGCA GCGCGTGTAG
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| Protein sequence | MSRLIIVSNR VAPISEGEPA AGGLAIGVYD ALKETGGMWF GWSGEVVASG APQIRIEERG
PVTFATVGLS RRDYDQYYRG FSNATLWPAF HYRADLIQYD RHEFDGYRRV NVWLAQQLVP
LLQDDDVIWV HDYHLIPFAR ALREAGVKNR IGFFLHIPFP AAQVLVNVPP HRELVESLCA
FDLLGFQTEP DLRAFCDYIE FEAGGEVARG GHTVRVNAFG NTLRAAAYPI GVYPDEIASL
AQAAENGKAV RTLATSLRGR QLIMSVDRLD YSKGLVERFR AFEKLLEHQT SIRNRVSFLQ
IAPSTRADLR AYQDIRLQLE AESGRINGRY AELDWAPILY IHRQYDRQVL AALYRLARVG
FVTPLRDGMN LVAKEYVSAQ NPDDPGVLVL SRFAGAAREL TGALIVNPID IDGMADALSQ
ALTMPLAERR ARYADMIAQL RENNVSVWRD NFLRDLQRV
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