Gene BamMC406_1036 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_1036 
Symbol 
ID6176631 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp1126192 
End bp1127064 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content68% 
IMG OID641680792 
Productmembrane protein 
Protein accessionYP_001807743 
Protein GI172060091 
COG category[S] Function unknown 
COG ID[COG3336] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.675997 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.424179 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGTCC TGTACTGGCT CGATCCGTGG GAACCGTCGC CGACCGTGGT CATCGCGGTG 
CTGACGGCAG CCGTGCTGTT CGCGCGCGGC GTGAAGAAGG CGAAGGTGTC GCCGCTGCGG
CAGTTCTCGT TCTGGTTCGG GCTGACGGCG CTCTACATCG CGCTGCATAC GCGGCTCGAC
TACTTCTTCG AGCATGAATT CTTCATGCAC CGCGCGCAGC ACCTCGTGCT GCATCATCTC
GGGCCGTTCT TCATCGCACT GGCGTACCCG GGCGCGGCGA TCCGCGCGGG CATTCCGTTT
CGCTGGCGGC AGCGCTTCGT GCGCCCCGCG CTCGCGTGGG CGCCCGTGCG CGCGACGCTC
GACGTGGTGT TCCATCCGGT CGTCGCGGTC GTGCTGTTCG TCGGGCTGAT CTATTTCTGG
CTGCTGTCGC CGATCCACTT CGTCGCGATG CTCGACTGGC GCCTGTATCG CGTGATGAAC
TGGAGCATGG TGATCGACGG GCTGCTGTTC TGGTGGCTCG TCGTCGATCC GCGTCCCGCG
CCGCCCGCGC GGCTGTCGCC GGGCCGCCGG GTCCTCATCG TCGTCGCGGC GATCCCGCCG
CAGATCGCGC TCGGCGCGCT GATCTTCTTC ACGCCGCACG AGCTGTATCC GATCTATTCG
ATCTGCGGAC GCGCGTTCAC GTGGCTCAGC CCGCTGCGTG ACCAGCAGAT CGGCGGCTTG
CTGCTGTGGA TTCCGGGTTC GATGATGAGC GTGATCGGCG CGCTGATCGC GCTGCGGCAC
TGGCTGCGGC TGTCCGCGCG CGGCCGTCTG ATCGACGAGC GCGCTGCTGC CCGGCGCGCG
GAGCACCCGC CGGTGACGCG CGCCGCCCAC TGA
 
Protein sequence
MNVLYWLDPW EPSPTVVIAV LTAAVLFARG VKKAKVSPLR QFSFWFGLTA LYIALHTRLD 
YFFEHEFFMH RAQHLVLHHL GPFFIALAYP GAAIRAGIPF RWRQRFVRPA LAWAPVRATL
DVVFHPVVAV VLFVGLIYFW LLSPIHFVAM LDWRLYRVMN WSMVIDGLLF WWLVVDPRPA
PPARLSPGRR VLIVVAAIPP QIALGALIFF TPHELYPIYS ICGRAFTWLS PLRDQQIGGL
LLWIPGSMMS VIGALIALRH WLRLSARGRL IDERAAARRA EHPPVTRAAH