Gene BamMC406_1017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_1017 
Symbol 
ID6176840 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp1107425 
End bp1108201 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content70% 
IMG OID641680769 
Productpyridoxine 5'-phosphate synthase 
Protein accessionYP_001807724 
Protein GI172060072 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0854] Pyridoxal phosphate biosynthesis protein 
TIGRFAM ID[TIGR00559] pyridoxine 5'-phosphate synthase 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTTCT TCCTGACAAC GCCCACCGCC ATCGATCTCG GCGTGAACAT CGACCACGTC 
GCGACGCTGC GCAACGCGCG CGGCACGGCC TATCCCGATC CGATCCGCGC GGCGCTCGCC
GCCGAAGAGG CCGGTGCGGA CGTGATCACG CTGCACCTGC GCGAGGACCG CCGCCACATC
GTCGACGCCG ACGTGCGCCA GCTGCGCCCG CTGCTGAAGA CGCGCATGAA CCTCGAGTGC
GCGGTGACGG CCGAGATGCT CGACATCGCG TGCGACGTGC GTCCGCACGA CGCGTGCCTC
GTGCCCGAGA AGCGCGAGGA GCTCACGACC GAAGGCGGCC TCGATGTCGC CGGCCGCTTC
GAGGCCGTGC GTGCGGCCTG CAAGCAGCTC GCCGACGCCG GCGTGCGCGT GTCGCTGTTC
ATCGACCCGG ACGAAACGCA GATCCGCGCC GCGCACGAAG CCGGTGCGCC GGTGGTCGAG
CTGCATACGG GCCGCTACGC CGATGCGCAC GACGAAGCCG AGCAGCAGCG CGAATACGAG
CGCATCGTCG CGGGCGTGCA GGCCGGCGCG CGACTGGGCC TGAAGGTCAA CGCGGGCCAC
GGCCTGCATT ACACGAACGT GCAGCAGATC GCCGCGATCG ACGGCATCGT CGAACTGAAC
ATCGGCCACG CGATCGTCGC GCACGCGATC TTCGCGGGCT GGGACAACGC GGTGCGCGAG
ATGAAGGCGA TCATGGTCGC CGCGCGTGTC GCAGCGCTCC ACGGCGGCGC GCGCTGA
 
Protein sequence
MSFFLTTPTA IDLGVNIDHV ATLRNARGTA YPDPIRAALA AEEAGADVIT LHLREDRRHI 
VDADVRQLRP LLKTRMNLEC AVTAEMLDIA CDVRPHDACL VPEKREELTT EGGLDVAGRF
EAVRAACKQL ADAGVRVSLF IDPDETQIRA AHEAGAPVVE LHTGRYADAH DEAEQQREYE
RIVAGVQAGA RLGLKVNAGH GLHYTNVQQI AAIDGIVELN IGHAIVAHAI FAGWDNAVRE
MKAIMVAARV AALHGGAR