Gene BamMC406_1001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_1001 
Symbol 
ID6176656 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp1092024 
End bp1093013 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content66% 
IMG OID641680753 
Product3-oxoacyl-(acyl carrier protein) synthase III 
Protein accessionYP_001807708 
Protein GI172060056 
COG category[I] Lipid transport and metabolism 
COG ID[COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III 
TIGRFAM ID[TIGR00747] 3-oxoacyl-(acyl-carrier-protein) synthase III 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCAAT CGACTCTCTA TTCCCGCGTG CTCGGCACGG GCAGCTACCT GCCGCCCGAC 
CGCGTCACGA ACCAGCAGCT CGCCGACCGT CTCGCGAAGG AAGGCATCGA GACGAGCGAT
GAGTGGATCG TTGCGCGCAC GGGCATCCAT GCGCGCCATT TCGCCGCACC GGACGTCACG
ACGAGCGATC TCGCGCTCGA AGCGGCGCGT CGTGCGATCG AGGCGGCCGA CATCGATCCG
CAATCGATCG ACCTGATTAT CGTCGCGACT TCGACCCCGG ATTTCGTGTT CCCCAGCACG
GCGTGCCTGC TGCAGAACAA GCTCGGCATC AGGAACGGCG GCGCGGCATT CGACGTGCAG
GCCGTGTGCT CCGGCTTCGC CTATGCGATG GCGACGGCCG ACAGCTTCAT CCGCAGCGGA
CAGCACCGTA CGGCGCTCGT GATCGGCGCG GAGACGTTCT CGCGCATTCT CGATTTCAAG
GACCGCACCA CCTGCGTGCT GTTCGGCGAC GGCGCGGGCG CGGTGATCCT GTCCGCATCG
GAAGAGCCAG GCGTGCTCGG CAGTGCGCTG CACGCGGACG GCAGCTATTC GCACATCCTC
TGCACGCCGG GCAACGTCAA TCGCGGCGTG ATCGACGGCA GCGCGTTCCT GTACATGGAC
GGGCAGGCCG TGTTCAAGCT CGCGGTCAAC GTGCTCGAAA AGGTCGCGAT CGAGGCACTC
GCCAAGGCGA ATCTCGCCCC CGAGCAGGTC GACTGGCTGA TTCCGCACCA GGCCAACATC
CGCATCATGA CCAGCACCTG CCGCAAGCTC GGCCTGCCGC AGGAGCGCAT GGTCGTGACG
GTCGACCAGC ACGGCAACAC GTCGGCTGCA TCGATCCCGC TGGCGCTCGA CACCGCGGTG
CGCGACGGTC GTATCAAGCG TGGTCAGCAC GTGCTGATCG AGGGCGTCGG CGGCGGCTTC
ACCTGGGGCG CGTCGGTCTT CCGCTTCTGA
 
Protein sequence
MAQSTLYSRV LGTGSYLPPD RVTNQQLADR LAKEGIETSD EWIVARTGIH ARHFAAPDVT 
TSDLALEAAR RAIEAADIDP QSIDLIIVAT STPDFVFPST ACLLQNKLGI RNGGAAFDVQ
AVCSGFAYAM ATADSFIRSG QHRTALVIGA ETFSRILDFK DRTTCVLFGD GAGAVILSAS
EEPGVLGSAL HADGSYSHIL CTPGNVNRGV IDGSAFLYMD GQAVFKLAVN VLEKVAIEAL
AKANLAPEQV DWLIPHQANI RIMTSTCRKL GLPQERMVVT VDQHGNTSAA SIPLALDTAV
RDGRIKRGQH VLIEGVGGGF TWGASVFRF