| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0991 |
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| Symbol | |
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| ID | 6176581 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 1081217 |
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| End bp | 1084396 |
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| Gene Length | 3180 bp |
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| Protein Length | 1059 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641680743 |
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| Product | ribonuclease |
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| Protein accession | YP_001807698 |
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| Protein GI | 172060046 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1530] Ribonucleases G and E |
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| TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.19075 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGCA TGCTGTTCAA TGCGACGCAG CAGGAGGAGC TGCGCGTCGC CATCGTCGAT
GGGCAAAAGC TCATCGACAT CGACATCGAG ACAGCCGGGC GCGAACAGCG CAAAGGCAAT
ATCTACAAAG GTGTCATCAC CCGTATCGAG CCGTCGCTCG AAGCGTGCTT CGTCAACTAC
GGCGAAGACC GCCACGGCTT CCTGCCGTTC AAGGAAGTCG CCCGCCAGTA CTTCAAGGAC
GGCATCGACA TGCGCTCCGC GCGCATCCAG GATGCGCTGC GCGAAGGCCA GGAACTGATC
GTTCAGGTCG AGAAGGAAGA GCGCGGCAAC AAGGGCGCCG CCCTCACGAC CTTCATCTCG
CTCGCCGGCC GCTACCTCGT GCTGATGCCG AACAATCCGC GCGGCGGCGG CGTGTCGCGC
CGGATCGAAG GCGACGAGCG CCAGGAACTG CGCGAAACGA TGGCGCAGCT GCAGATTCCG
GACGGCATGA GCATGATCGC CCGCACCGCG GGCATCGGCC GCAGCGCCGA GGAACTGCAG
TGGGACCTGA ACTACCTGCT GCAGCTGTGG CGCGCGATCG AAGCGGCGTC GCAAAGCGGC
AATGCCGGCC AGCCGATGCT GATCTATCTG GAATCGAGCC TCGTGATCCG CGCGATCCGG
GACTATTTCC AGCCCGATAT CGGCGAAATC CTGATCGACA CGACCGAGAT CCACGATCAG
GCCCGTGCGT TCATGGACAT CGTGATGCCG GACAACGTGT CGAAGGTGAA GCGCTACCAC
GACGACGTGC CGCTCTTCTC CCGCTTCCAG ATCGAGCACC AGATCGAGAC GGCCTACTCG
CGCACGGTAC CGCTGCCGTC CGGCGGCGCG ATCGTGATCG ACCACACCGA GGCACTCGTC
GCGATCGACG TGAACTCGGC GCGCGCGACC AAGGGCGCGG ACATCGAGGA AACGGCGACC
CGCACGAACC TCGAGGCGGC GGACGAAGTG GCCCGCCAGC TGCGCCTGCG CGACCTCGGC
GGCCTGATCG TGATCGACTT CATCGACATG GAGTCGGCCA AGAGCCAGCG CGAAGTCGAG
CAACGCCTGA AGGACGCGCT CAAGCACGAC CGTGCGCGCG TGCAGATGGG CAAGATCTCC
CGCTTCGGCC TGATGGAACT GTCGCGCCAG CGCCTGCGTC CGGCGCTGTC GGAAGGCAGC
CACGTGACGT GCCCGCGCTG TAACGGCACC GGCCACATCC GCGATACCGA ATCGTCCGCG
CTGCAGGTCC TGCGGATCAT TCAGGAAGAA GCGATGAAGG AAAACACCGC GGCGATCCAC
TGCCAGGTGC CGGTCGAGGT GACCGCCTTC CTGCTCAACG AAAAACGTCA GGAAATCAAC
AAGATCGAGT CGCGCTTCAA GGTCGGCATC GTGCTGATCC CGAACAAGCA CCTCGATACG
CCGCACTACA AGCTCGAGCG CCTGCGTCAT GACGACGCGC GCCTCGACGA TCCGCGCGCG
TCCTGGAAGA TGGCCGAGGA AGCCGCCCGC GAACTGGAGT CGGAAACCGG CTACAGCAAG
CGCACGGCCG ACGTGAAGCC GAAGCAGGAA GCGGCGGTCA AGGGCATCAC GCCCGAGCGC
CCGGCGCCGA GCGCGGCACC GCAGCGCCCG GCCGAGCCGG TTGCGGCGGC GCCCGCCCCG
GTCGCCGTGG CAAGCAACGG CGGCTTCATC GGCTGGCTGA AGGGTCTGTT CGGCATGTCG
CCCGCTCCGG CGCCCGCGCC GGTTGCACCG GCACCGGCGA AGGAACAGGC TGCCCGTCCG
GCCCGCGAGC GCACCGAGAA GACCGAGCAG CGCGGCGGCG ATCGCAACCG CAACCGCCGC
GGCGGCGCCC AGCAGGCTCA GGGAGGCCGC GACCAGGCAG CGACGGGCCG TGGCCAGTCG
CAACGCCAGG AACGCGAAGG CAAGGAAATT CGCGAGCCGC GTGAACCGCG CGAGGGTCGT
GAACCGCGTG AAAGCCGCGA GCCGCGCGAA AGCCGTGAGG GTCGCGAAAG TCGTGAGGGC
CGTGGCCCGC GCGAAGGCCG CGAACCGCGC GAGCCGCGTG AAAGCCGTGA GAACCGCGAG
CCGCGCGAGA GCCGCGAACC GCGCGAGCGC GTCGAGCAGC CGGAAGCCGT CGAGGCCGGC
GGCCGCGGCG AGCGCCAGGA ACGCGGCGAA CGTCGCGAGC GTGGTGAGCG CCGCAAGCCG
GTGCAGCACG CTGCGACGCT TGAGACCGTC AATCGTGGCG AGAACCATCC GGAAGCGGAA
GCCGACCAGG CCGTCGCAGC GCTGCCGGGC GCCGATGTCG GTGCCGACGC GGAAGCCGGC
GCACGTGACG GCGAGGAACG TCGCCGTCGC CGCCGCGGCC GCCGCGGTGG TCGTCGCGAG
CGCGAGGACG AAGGCTCGGT GGTCGAGCAC GCCGAGCAAG GTGCAGATGG CGAAAACCCC
GTGCACGCCG TGACGACGGA AGCGCCGAAC GCGGTCGAGC CGGCCCGTAC GGCCGCACCG
GTCGCCGTGG CGTCCATGGC AGCCGTTTCG GCAGCAGGCG CCGCGGTTGC GGAAGCCGAA
GTCGAGGAAC GTGCCGAAGC GGTCGCACCG GCCGCGGTCG AGTCGCAAAC GGCACCGGTT
CGTGTCGAAG CGACGCCGGT CGCACCGCTC GAGCCCGCCC CGGTCGCACC GGCAGCCGAA
CCGGCACCGG TCGCGCCGGC CGCCGAATCG GAAGCCGGTC CGGCTCCGGT CGCGGTTTCG
CCGACCGATG CGTTCGAAGT GCCGGCCGCA CCGGCTACCG TCGAAGCGCC GCAGTCTGCG
CGCGTCGAAC AGGCCGCACC GGCACCGGTC GTCGCAGCTG AAGTCGCTCC GGCACCCGTT
ACTCCGGCAC CGGTCGCACC GGCTCACGTC GAACCGGCTC GCGTCGAGGC CGCACCGGCC
GAAACCGTTG CCACGCCGGC TCCGGCGCCC GCCCAGCCGG CCCCCGCGCC TGCTTCGGCG
AGCCTCGATG CCGTGCTGGA GCAAGCCGGT CTCGTGTGGG TGAACACGGA CGCCGACAAG
TTCCGCGCTG CCCAGGAAGC CGCGTCGCGC CTGCCGCGTC CGCCCCGCGT GCCGCGCGAG
CGCAAGGCGC AGCCGCCGGT CGACCCGACT CCGATGCAGC AGGTCGAAAC GCACCGCTAA
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| Protein sequence | MKRMLFNATQ QEELRVAIVD GQKLIDIDIE TAGREQRKGN IYKGVITRIE PSLEACFVNY
GEDRHGFLPF KEVARQYFKD GIDMRSARIQ DALREGQELI VQVEKEERGN KGAALTTFIS
LAGRYLVLMP NNPRGGGVSR RIEGDERQEL RETMAQLQIP DGMSMIARTA GIGRSAEELQ
WDLNYLLQLW RAIEAASQSG NAGQPMLIYL ESSLVIRAIR DYFQPDIGEI LIDTTEIHDQ
ARAFMDIVMP DNVSKVKRYH DDVPLFSRFQ IEHQIETAYS RTVPLPSGGA IVIDHTEALV
AIDVNSARAT KGADIEETAT RTNLEAADEV ARQLRLRDLG GLIVIDFIDM ESAKSQREVE
QRLKDALKHD RARVQMGKIS RFGLMELSRQ RLRPALSEGS HVTCPRCNGT GHIRDTESSA
LQVLRIIQEE AMKENTAAIH CQVPVEVTAF LLNEKRQEIN KIESRFKVGI VLIPNKHLDT
PHYKLERLRH DDARLDDPRA SWKMAEEAAR ELESETGYSK RTADVKPKQE AAVKGITPER
PAPSAAPQRP AEPVAAAPAP VAVASNGGFI GWLKGLFGMS PAPAPAPVAP APAKEQAARP
ARERTEKTEQ RGGDRNRNRR GGAQQAQGGR DQAATGRGQS QRQEREGKEI REPREPREGR
EPRESREPRE SREGRESREG RGPREGREPR EPRESRENRE PRESREPRER VEQPEAVEAG
GRGERQERGE RRERGERRKP VQHAATLETV NRGENHPEAE ADQAVAALPG ADVGADAEAG
ARDGEERRRR RRGRRGGRRE REDEGSVVEH AEQGADGENP VHAVTTEAPN AVEPARTAAP
VAVASMAAVS AAGAAVAEAE VEERAEAVAP AAVESQTAPV RVEATPVAPL EPAPVAPAAE
PAPVAPAAES EAGPAPVAVS PTDAFEVPAA PATVEAPQSA RVEQAAPAPV VAAEVAPAPV
TPAPVAPAHV EPARVEAAPA ETVATPAPAP AQPAPAPASA SLDAVLEQAG LVWVNTDADK
FRAAQEAASR LPRPPRVPRE RKAQPPVDPT PMQQVETHR
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