Gene BamMC406_0976 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_0976 
Symbol 
ID6176351 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp1066225 
End bp1066998 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content70% 
IMG OID641680726 
ProductAzlC family protein 
Protein accessionYP_001807683 
Protein GI172060031 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1296] Predicted branched-chain amino acid permease (azaleucine resistance) 
TIGRFAM ID[TIGR00346] 4-azaleucine resistance probable transporter AzlC 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.53015e-05 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGAAGC GTCCCTTGAA TCCCTCATCC ACACCGTCGC CCCCGCCGCG CCGTCCGTTC 
AACGAATGGC TCGACGGCGC GCGCGACACA ATCCCGATGA TGATCGGCGC GGCGCCGTTC
GGCGTGATCT TCGGCACGCT CGTCGCCGGC GGGCCGCTGG CCGCCTGGCA CGGCACGCTG
ATGTCGCTCG CGGTGTTCGC GGGCTCCGCG CAGTTCATCG CGCTCGGCCT GATCGCCGGC
AGCGCGAGCT TCGTCGTCGT GCTCGCAACG ACGCTGATCG TGAACCTGCG TCACCTGCTG
TACAGCGCCA CGCTCGCGCC GTACGTCGCA CACCTGCCGC TGCGCTGGCG CGCGACGCTC
GGCGCGCTGC TGACCGACGA AGTGTTCGCG GTCGCCTACT CGCACTACCG GCACTTCCCG
CCCGGTGCGA TCGGCCCCCA CTACTTCTTC GGTTCGGGCC TCGCGATGTA CCTGAACTGG
CAGGTCTGGA CGCTCGCGGG CATTGGCTTC GGCGCGGCCT TCCCCGGCCT CCAGTCACTC
GGCCTCGATT TCGCGATGGC GGCGACCTTC ATCGCGATCG TCGTCCCGCA GCTCGGCAAG
CTGCGCTATT TCGCGGCCGC CGCGACAGCC GGCACGCTCG CGTACTTCTG GCAGGGCTGG
CCGTACAAGC TCGGGTTGTT GGGCGCGGTC GCCGCCGGCG TCGTAGTCGG TGTCGCGCTC
ACGCTGCGGC ACGAGCGCTC GCGCACCGGT TCACGCACGG AGGCCGCCTC GTGA
 
Protein sequence
MEKRPLNPSS TPSPPPRRPF NEWLDGARDT IPMMIGAAPF GVIFGTLVAG GPLAAWHGTL 
MSLAVFAGSA QFIALGLIAG SASFVVVLAT TLIVNLRHLL YSATLAPYVA HLPLRWRATL
GALLTDEVFA VAYSHYRHFP PGAIGPHYFF GSGLAMYLNW QVWTLAGIGF GAAFPGLQSL
GLDFAMAATF IAIVVPQLGK LRYFAAAATA GTLAYFWQGW PYKLGLLGAV AAGVVVGVAL
TLRHERSRTG SRTEAAS