| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0971 |
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| Symbol | |
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| ID | 6176174 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 1062407 |
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| End bp | 1063795 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641680721 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_001807678 |
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| Protein GI | 172060026 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.500099 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCATT CCGGTCTCAC GCGGACGGCC GCCGCGCCGC CATCCCTGTC CAGTCATGCC
GCCGATACCG CGCGCCTCGC CGCGCCGCTC GCGATCGCAC AGCTCTCGCA GATGGCGATG
AGCGTCACCG ACACGGTGCT GCTCGGCTCG CTCGGCCCCG ATTCGCTCGC GGCGGGCGGC
CTCGGCGCGA ACTACTTCTT CGTCATCGTG ACGGTGCTGC AGGGCGTGCT GTCATCGGTC
AGCGTGAGCG TCGCGCATGC GCGCGGCGCG CAGGCGGAAC ACCGCGTGCC GCACATCTAC
TGGACCGGCT TCGTACTGTC GTTGCTGCTC GCGATTCCGG CGATCGTCGC GCTGTCGTTG
TCGGAGCCGA TCCTGCTGAT GTTCCACGAG CCCCCGACGC TCGCGCATCA CGTCGGCGAA
TACACCGGCA TCCTGCGGTT CGCGGCGCTC GGCAGCCTGA TCGGCGTCGG GCTGATGCGC
GCCTTCCTTC CCGCGATCGG CGCCGCGCGG CGGCTGCTGT GGGTGTCGAT CGGCGGTGTC
GGCGTCAACG CCGTGCTGAA CTACGGGCTG ATCCACGGTG CATTCGGCTT GCCGCGGTTC
GGCTTCCTCG GCTCCGCGGT CGCGACGACC ATCACGATCT GGCTCACCGC GCTCGCGCTG
ATCTGGCTGC TGCACGGCCG CGAGCGGTTC CGCCATTTCG TGACGGCCGC CCGCCCGAAA
CTGCCCATGA TGGGCGAGCT GATCGGCATC GGCTGGCCGG TGGCGATCAC GTATGGGGTC
GAATCGACGC TGTTTCTCGC GACGGGCCTG ACCGTCGGCG TGCTCGGCGC GACGTCGCTC
GCCGCGCACC AGATCGCGCT GAACGTCGCA TCGCTGGCGT TCATGGTGCC GCTCGCGATC
GGGCAGGCCG CGAACGTACG GGTCGGCTAC TGGGTCGGCG CCGGCGAGCC GGTCGCCGCG
CGGCACGCGG GCTTCGTCGC GCTCGGCCTC GGCGTCGCAT TCATGTCGCT GTCGGGACTC
GTGCTGATCG TCGCGCCCCA TGCGATCGTC GGCCTGTACC TGCACCTCGA CGACCCGGCC
AACGCGGCGA CCGTGTCGCT TGCGGCGTCG CTGCTCGGCA TCGCCGCGGT GTTCCAGATC
GTGGACGGGA TGCAGACGGT CGCGTCGGGC GCGCTGCGCG GGCTGCGGGA TACGCGCATC
CCGATGCTCG CGGCCACCCT CGGCTACTGG GGCATCGGCT TCCCGACCGG TTACTGGTTG
GCGTTCCACG CGGGCCTCGG CGCACGCGGC CTGTGGTGGG GGCTCGCGGC CGGCCTCGCC
AGCGTCGCCG TGCTGATGGC CTGTCGCTTT CACATGAAGA CCGCGTCGCT CATCGCGTCG
GCGCGCTGA
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| Protein sequence | MSHSGLTRTA AAPPSLSSHA ADTARLAAPL AIAQLSQMAM SVTDTVLLGS LGPDSLAAGG
LGANYFFVIV TVLQGVLSSV SVSVAHARGA QAEHRVPHIY WTGFVLSLLL AIPAIVALSL
SEPILLMFHE PPTLAHHVGE YTGILRFAAL GSLIGVGLMR AFLPAIGAAR RLLWVSIGGV
GVNAVLNYGL IHGAFGLPRF GFLGSAVATT ITIWLTALAL IWLLHGRERF RHFVTAARPK
LPMMGELIGI GWPVAITYGV ESTLFLATGL TVGVLGATSL AAHQIALNVA SLAFMVPLAI
GQAANVRVGY WVGAGEPVAA RHAGFVALGL GVAFMSLSGL VLIVAPHAIV GLYLHLDDPA
NAATVSLAAS LLGIAAVFQI VDGMQTVASG ALRGLRDTRI PMLAATLGYW GIGFPTGYWL
AFHAGLGARG LWWGLAAGLA SVAVLMACRF HMKTASLIAS AR
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