Gene BamMC406_0969 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_0969 
Symbol 
ID6178734 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp1060268 
End bp1060780 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content66% 
IMG OID641680719 
Productthioesterase superfamily protein 
Protein accessionYP_001807676 
Protein GI172060024 
COG category[I] Lipid transport and metabolism 
COG ID[COG1607] Acyl-CoA hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCCAC AGTCCCCCGT ACCCGCCGCC CTGGACCGCA CCGAAACCGT ATTCCGCTTC 
CTCGCCGAGC CGTCGTCCGT GAACTTTGGC GGCAAGGTGC ACGGCGGCGC GCTGATGAAG
TGGATCGACG AGGTCGCGTA TGCGTGCGCG GCAGTCTGGT CGAGCCGCTA TTGCGTGACG
GTCAGCGTCG GCAACATCCG CTTCCAGCGT CCGATCCTCG TCGGCAACCT GGTCGAGCTG
AAGGCGCGCG TCGTCGCGAC GGGCCGCACC AGCATGCACA TCCATGTGTC CGTGCATGCC
GGCGATCCGA AGGGGGGCGT GCTGCGTCAG ACGACCGACT GTCTCGTCGT GTTCGTCGCG
GTCGACGAGA ACGGCAACCC GGTGCCGGTG CCACCGTTCG TGCCCGAGAC CGACGAGCAG
AAAGTGCTCG CGAAATATGC GGCCGACGTG CGCGCCGCGC TCGACAAGAT CGTCGAGATG
AAACCCGAGG AAGTGGCGAA GGGCACCGTC TGA
 
Protein sequence
MSPQSPVPAA LDRTETVFRF LAEPSSVNFG GKVHGGALMK WIDEVAYACA AVWSSRYCVT 
VSVGNIRFQR PILVGNLVEL KARVVATGRT SMHIHVSVHA GDPKGGVLRQ TTDCLVVFVA
VDENGNPVPV PPFVPETDEQ KVLAKYAADV RAALDKIVEM KPEEVAKGTV