| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0945 |
|---|
| Symbol | |
|---|
| ID | 6178637 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010551 |
|---|
| Strand | + |
|---|
| Start bp | 1038196 |
|---|
| End bp | 1038744 |
|---|
| Gene Length | 549 bp |
|---|
| Protein Length | 182 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 641680695 |
|---|
| Product | AsnC family transcriptional regulator |
|---|
| Protein accession | YP_001807652 |
|---|
| Protein GI | 172060000 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1522] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.962352 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTATTGT CGAATGTGCA GGTTTTGTTA TCGTATTTTT CAGGTTTTCA GAATAAACAA
ATGAGAACGC AACGCCAGCC AGTACGCTCG CTCGACAAGC TCGACCGCCG CATCCTCAAA
CTGCTGCAGG ACGACGGCCG GATGGCGATG AAGGACCTCG CGGAGCAGGT CGGCCTGACC
GTGACGCCGT GCATCGAACG CGTGCGGCGC ATGGAGCGCG ACGGCGTCAT CACCGGCTAT
CACGCACGCG TCGATCCGGG CCAGCTCGGC GCCGCACTGC TGGTGTTCGT CGAGATCACC
CTCGGCCACA AGGGCGGCAA CATGTTCGAG CAGTTCCGTC GCGAAGTGAT GAAGATCGAC
GAGGTGCTCG AATGCCATCT CGTGTCCGGC GACTTCGACT ACCTGATCAA GGCGCGGATC
GGTGAAATGG CCGACTATCG CAAGCTGCTC GGCGACATCC TGCTGCAACT GCCCGGCGCG
GTGCAGTCGA AGAGCTATGT CGTGATGGAG GAAATCAAGG AAACGCTGAC GATTTCGGTC
GGCGAATGA
|
|---|
| Protein sequence | MVLSNVQVLL SYFSGFQNKQ MRTQRQPVRS LDKLDRRILK LLQDDGRMAM KDLAEQVGLT
VTPCIERVRR MERDGVITGY HARVDPGQLG AALLVFVEIT LGHKGGNMFE QFRREVMKID
EVLECHLVSG DFDYLIKARI GEMADYRKLL GDILLQLPGA VQSKSYVVME EIKETLTISV
GE
|
|---|
| |