| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0925 |
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| Symbol | |
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| ID | 6178901 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 1017580 |
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| End bp | 1018884 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641680675 |
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| Product | 3-phosphoshikimate 1-carboxyvinyltransferase |
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| Protein accession | YP_001807632 |
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| Protein GI | 172059980 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0128] 5-enolpyruvylshikimate-3-phosphate synthase |
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| TIGRFAM ID | [TIGR01356] 3-phosphoshikimate 1-carboxyvinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.340528 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACTATC TCGATCTCGG CCCGTATTCC AGCGCTTCGG GCACCGTGCG CCTGCCCGGC
TCGAAGAGCA TCTCGAACCG CGTGCTGCTG CTCGCGGCGC TTGCCGAAGG CGACACGACG
ATCACCAACC TGCTGGATTC CGACGACACG CGCGTGATGC TCGATGCGCT CGGCAAGCTC
GGCGTGAAGC TCGCGCGCGA CGGCGACACC TGTGTCGTCA CCGGCACGCG CGGCGCGTTC
ACCGCGAAGA CGGCCGACCT GTTTCTCGGC AATGCGGGCA CGGCGGTGCG ACCGTTGACG
GCGGCGCTCG CGATCAACGG CGGCGACTAT CGCGTGCACG GCGTGCCGCG CATGCACGAG
CGGCCGATCG GCGACCTCGT CGACGGCCTG CGCCAGATCG GCGCGCAGAT CGACTACGAG
CAGAACGAAG GCTTTCCGCC GCTGCGGATC AAGCCCGGGA CGATCTCGGT CGACGCGCCG
ATCCGCGTGC GCGGCGATGT ATCGAGCCAG TTCCTCACCG CGCTGCTGAT GACGCTGCCG
CTCGTGAAGG CGAAGGATGG CAGGACCGTC GTCGAAATCG ATGGCGAGCT GATCTCGAAG
CCGTACATCG ATATCACGAT CCGGCTGATG GAGCGTTTCG GCGTGACCGT CGAGCGCGAC
GGCTGGCAGC GCTTCGTCGC GCCGGCCGGC GTCCGCTACC GGTCGCCGGG ACGCATCATG
GTCGAGGGCG ATGCGTCGTC GGCCTCGTAC TTCCTCGCGG CCGGCGCGCT CGGCGGTGGT
CCGCTGCGCG TCGAGGGCGT GGGGCGCGCA AGCATCCAGG GCGACGTCGG CTTCGCCAAT
GCGCTGATGC AGATGGGGGC GAACGTGTCG ATGGGCGACG ACTGGATCGA GGTGCGCGGC
ATCGGCCACG ACCACGGCAA GCTCGACCCG ATCGACATGG ACTTCAACCT CATTCCCGAC
GCGGCGATGA CCATCGCGGT CGCGGCGCTG TTCGCGAGCG GCACGAGCAC GCTGCGCAAT
ATCGCGAGCT GGCGCGTGAA GGAAACCGAC CGCATCGCGG CGATGGCGAC CGAGCTGCGC
AAGGTCGGCG CGATCGTCGA GGAAGGTGCC GACTATCTGG TCGTCACGCC GCCGCAACGG
CTCACGCCGA ATGCCGCGAT CGACACGTAC GACGATCACC GCATGGCGAT GTGCTTCTCG
CTCGTCAGCC TGGGTGGCGT GCCCGTGCGG ATCAACGATC CGAAGTGCGT CGGCAAGACG
TTTCCCGACT ATTTCGACCG CTTCGCCGCG CTCGCCAAAG CCTGA
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| Protein sequence | MDYLDLGPYS SASGTVRLPG SKSISNRVLL LAALAEGDTT ITNLLDSDDT RVMLDALGKL
GVKLARDGDT CVVTGTRGAF TAKTADLFLG NAGTAVRPLT AALAINGGDY RVHGVPRMHE
RPIGDLVDGL RQIGAQIDYE QNEGFPPLRI KPGTISVDAP IRVRGDVSSQ FLTALLMTLP
LVKAKDGRTV VEIDGELISK PYIDITIRLM ERFGVTVERD GWQRFVAPAG VRYRSPGRIM
VEGDASSASY FLAAGALGGG PLRVEGVGRA SIQGDVGFAN ALMQMGANVS MGDDWIEVRG
IGHDHGKLDP IDMDFNLIPD AAMTIAVAAL FASGTSTLRN IASWRVKETD RIAAMATELR
KVGAIVEEGA DYLVVTPPQR LTPNAAIDTY DDHRMAMCFS LVSLGGVPVR INDPKCVGKT
FPDYFDRFAA LAKA
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