| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0903 |
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| Symbol | |
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| ID | 6176361 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 992387 |
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| End bp | 993682 |
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| Gene Length | 1296 bp |
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| Protein Length | 431 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641680653 |
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| Product | general substrate transporter |
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| Protein accession | YP_001807610 |
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| Protein GI | 172059958 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00883] metabolite-proton symporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.289816 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCACAG CAACACAAGC CATCGCGCAG GAGTCGAAAG TCCGCACCGT GTTCCGGGTC
GTCAGCGGCA ACTTCCTGGA AATGTACGAC TTCATGGTCT ACGGGTATTA CGCGTCGGCC
ATCGCGAAAA CCTACTTTCC GAGCGGCAAC GCGTTCGCGT CGCTGATGCT GTCGCTGTCG
GTGTTCGGCG CGGGCTTCCT GATGCGCCCG GTCGGCGCGA TCGTGCTCGG CGCGTACATC
GACCATCACG GCCGCCGCAA GGGGCTGATC CTGACGCTCG GGCTGATGGC GCTCGGCACG
CTGACGGTGG CCGGGGTTCC CGGCTACGCG ACGATCGGCG TGCTCGCGCC GGCGCTCGTG
CTGCTCGGCC GGTTGCTGCA GGGCTTTTCC GCGGGTGTCG AGCTGGGCGG CGTGTCGGTC
TATCTGTCGG AGATCGCGAC GAAGGGCCAC AAGGGGTTCT ATACGTCATG GCAATCGGGC
AGCCAGCAGG TGGCGGTCGT GTTCGCCGCG TTTGTCGGCG TGCTGCTGAA CCGCGTGCTG
CCGGCCGAGG ACATGAGCGC GTGGGGCTGG CGCATCCCGT TCCTGATCGG CTGCCTGATC
GTGCCGTTCC TGTTCCTGAT CCGTCGTTCG CTGAAGGAAA CCGACGAGTT CCTCGCGAAG
CGCCACCGTC CGACGATGGG CGAGATCATG CGTTCGATGC TCGAGAACTG GGGTGTCGTG
ATCGCCGGCA TGGGGATGGT GATCATGACG ACGGTGTCGT TCTACATGAT CACCGCATAT
ACGCCGACGT TCGGCAAGGA AGTGCTGCAT CTGTCGTCGC TCGACGCACT CGTCGTGACC
GTCTGCGTCG GCCTGTCCAA CCTCGTGTGG CTGCCGCTGT CCGGCGCGCT GTCGGATCGC
ATCGGCCGCC GGCCGGTGCT GATCGCGTTC ACGGTGCTCA CGCTGCTGTC GGCCTATCCG
GCCGTGCTGT GGCTCGTGGC CGAACCGTCG TTCCTGCGGC TGCTGGCGGT CGAGCTGTGG
CTGTCGTTCC TGTACGGCTC TTACAACGGC GCGATGGTCG TCGCGTTGAC CGAAGTGATG
CCGGTCGACG TGCGCACCGC CGGCTTCTCG CTCGCGTACA GCCTCGCGAC GACGATCGGC
GGCTTCACGC CCGCGATCTC GACGTTGCTG ATCCATCAGA CCGGCAACAA GGCGGCACCG
GGGCTGTGGC TGAGCGTCGC GGCGCTTTGC GGGCTGATCG CGACGCTCGT GCTGTATCGC
ACGCCCGAGT CGCGCAACCA GTACAAGGCG GCCTGA
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| Protein sequence | MSTATQAIAQ ESKVRTVFRV VSGNFLEMYD FMVYGYYASA IAKTYFPSGN AFASLMLSLS
VFGAGFLMRP VGAIVLGAYI DHHGRRKGLI LTLGLMALGT LTVAGVPGYA TIGVLAPALV
LLGRLLQGFS AGVELGGVSV YLSEIATKGH KGFYTSWQSG SQQVAVVFAA FVGVLLNRVL
PAEDMSAWGW RIPFLIGCLI VPFLFLIRRS LKETDEFLAK RHRPTMGEIM RSMLENWGVV
IAGMGMVIMT TVSFYMITAY TPTFGKEVLH LSSLDALVVT VCVGLSNLVW LPLSGALSDR
IGRRPVLIAF TVLTLLSAYP AVLWLVAEPS FLRLLAVELW LSFLYGSYNG AMVVALTEVM
PVDVRTAGFS LAYSLATTIG GFTPAISTLL IHQTGNKAAP GLWLSVAALC GLIATLVLYR
TPESRNQYKA A
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