Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_0899 |
Symbol | |
ID | 6178681 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | - |
Start bp | 988142 |
End bp | 988822 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641680649 |
Product | GntR family transcriptional regulator |
Protein accession | YP_001807606 |
Protein GI | 172059954 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.742389 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGCCT TGCCCGATGC CCTACCCGAC CGCCCCGCCG CCTCGACGCT CAGCCTCGCC GAGCGCGCGT ACGCGCTGAT CCAGCGCGAC ATCATCACGA TGCGCCTGAA GCCCGGCGCC GCGCTCAACG AAGCCGACCT CGTCGCACGC ACCGGCATCG GCCGCACGCC CGTCCATCAG GCCGTGCACC GGCTGGTGCT CGAAGGGCTG CTGTCGGTTA TGCCGCGCAA GGGGCTGCTG GTGCAACCGC TGTCGCTCGA CGACATCGTC GCGGTGATCG ACGTGCGGCG CATCAACGAA GCGCACTGCG TCGAACTCGC CGCCCGCCAT GCGACGCCCG ACGATCTCGC CCGCATCGCC GCGCTGCTCG ACGACGGGCA GTCGTGCGTC GACACGCACG ACGTCGAAGG CATGATGGAG CTCGACCGCG CGTTTCATCA GGCGATCGCC GCGGCGGCAC GCAACACGGT GCTCGCGGAG ATCCTGCGCG CGCTGCACGA ACGCTCGCTG CGCTTCTGGT TCGTGACGCT GTCCGAACCG CACCACCTGT CCGACGTCCA GCGCGAGCAC CGCGAACTGT TCGAGCGGGT GTCCGCGCGC GACGCCGCCG GCGCACGCGC GGCCGTCGAA CGTCATATCG ATTCGTTTCG CGCCACCCTT GTCCAACATC TTCGCCCCTG A
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Protein sequence | MNALPDALPD RPAASTLSLA ERAYALIQRD IITMRLKPGA ALNEADLVAR TGIGRTPVHQ AVHRLVLEGL LSVMPRKGLL VQPLSLDDIV AVIDVRRINE AHCVELAARH ATPDDLARIA ALLDDGQSCV DTHDVEGMME LDRAFHQAIA AAARNTVLAE ILRALHERSL RFWFVTLSEP HHLSDVQREH RELFERVSAR DAAGARAAVE RHIDSFRATL VQHLRP
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