| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0875 |
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| Symbol | |
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| ID | 6178608 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 963166 |
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| End bp | 964308 |
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| Gene Length | 1143 bp |
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| Protein Length | 380 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641680624 |
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| Product | outer membrane insertion C-terminal signal |
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| Protein accession | YP_001807582 |
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| Protein GI | 172059930 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.223148 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGA CCCTGATCGT CGCCGCATTG GCGGGCGTGG CTGCCAGCGC CGCCCATGCG
CAAAGCAGCG TCACGCTGTA CGGCCTGATC GATGCCGGCA TCACCTACAC GAACAACCAG
CATGGTCACA GCGCGTGGCA GGAGACGAGC GGCTCGATCA ACGGCAGCCG CTGGGGCCTG
CGCGGCACCG AGGATCTCGG CGGCGGATTG AAGGCGATCT TCACGCTGGA AAACGGCTTC
GGCATCAACA ACGGTTCACT GAAGCAGAAC GGCCGCGAGT TCGGTCGTCA GGCGTTCGTC
GGGCTCGCGC ACGAAAGCTA CGGTTCCCTC ACGCTCGGCC GCCAGTACGA CAGCGTCGTC
GACTACCTCG GCCCGCTGTC GCTAACCGGC ACCCAGTACG GCGGCACGCA GTTCGCGCAT
CCGTTCGACA ACGACAACCT GAACAACTCG TTCCGGATCA ACAACTCGGT GAAGTACCAG
AGCGCGAACT ACGGCGGCCT GAAGTTCGGC GGGCTGTACG GCTTTTCGAA TTCCACCGGT
TTCGCAAACA ATCGCGCGTA CAGCGTCGGC GCGTCGTACA GCTACATGGG CTTCAACGTC
GCGGCCGCGT ACATGCAGCT CAACAACAAC ATCAACGCGC TGGCGCTCGC GGCCAGCGAC
CCCGGCGCGG TGGCCGGCGA CTGGACCTTC GCGGCCAGCC GGCAGCGCAC GTGGGGCGCA
GGCCTGAACT ACACGTTCGG GCCCGCGACG GCCGGCTTCG TGTTCACGCA GACACGCCTG
ACCAATTCGG CCGGGATCAG CGCCGGGCAA TCCGGCGTGT CGACCGGCAT CCCGCTCGCC
GGCGGCACGC GCTTCAACAA TTACGAGGTG AACGGCCGCT ACGCGCTGAC GCCGGCGTTC
TCGCTCGCCG GCTCGTACAC GTACACCGAC AGCCGCCTCG ACGGCCAGAC GCCGAGCTGG
CATCAGTTCA ACCTGCAGGC CGACTATGCG CTGTCGAAGC GCACCGACCT GTACCTGCAG
AGCGAATACC AGCGGGTCAA TGCCAATGGG CTCGCGATCG GCGCGAACAT CAACGGACTC
GGCGCCGCAT CGTCGACGAA CAAGCAGATC GCCGTCACGG CCGGCATGCG CCACCGCTTC
TGA
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| Protein sequence | MKKTLIVAAL AGVAASAAHA QSSVTLYGLI DAGITYTNNQ HGHSAWQETS GSINGSRWGL
RGTEDLGGGL KAIFTLENGF GINNGSLKQN GREFGRQAFV GLAHESYGSL TLGRQYDSVV
DYLGPLSLTG TQYGGTQFAH PFDNDNLNNS FRINNSVKYQ SANYGGLKFG GLYGFSNSTG
FANNRAYSVG ASYSYMGFNV AAAYMQLNNN INALALAASD PGAVAGDWTF AASRQRTWGA
GLNYTFGPAT AGFVFTQTRL TNSAGISAGQ SGVSTGIPLA GGTRFNNYEV NGRYALTPAF
SLAGSYTYTD SRLDGQTPSW HQFNLQADYA LSKRTDLYLQ SEYQRVNANG LAIGANINGL
GAASSTNKQI AVTAGMRHRF
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