Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_0875 |
Symbol | |
ID | 6178608 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | - |
Start bp | 963166 |
End bp | 964308 |
Gene Length | 1143 bp |
Protein Length | 380 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641680624 |
Product | outer membrane insertion C-terminal signal |
Protein accession | YP_001807582 |
Protein GI | 172059930 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3203] Outer membrane protein (porin) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.223148 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAGA CCCTGATCGT CGCCGCATTG GCGGGCGTGG CTGCCAGCGC CGCCCATGCG CAAAGCAGCG TCACGCTGTA CGGCCTGATC GATGCCGGCA TCACCTACAC GAACAACCAG CATGGTCACA GCGCGTGGCA GGAGACGAGC GGCTCGATCA ACGGCAGCCG CTGGGGCCTG CGCGGCACCG AGGATCTCGG CGGCGGATTG AAGGCGATCT TCACGCTGGA AAACGGCTTC GGCATCAACA ACGGTTCACT GAAGCAGAAC GGCCGCGAGT TCGGTCGTCA GGCGTTCGTC GGGCTCGCGC ACGAAAGCTA CGGTTCCCTC ACGCTCGGCC GCCAGTACGA CAGCGTCGTC GACTACCTCG GCCCGCTGTC GCTAACCGGC ACCCAGTACG GCGGCACGCA GTTCGCGCAT CCGTTCGACA ACGACAACCT GAACAACTCG TTCCGGATCA ACAACTCGGT GAAGTACCAG AGCGCGAACT ACGGCGGCCT GAAGTTCGGC GGGCTGTACG GCTTTTCGAA TTCCACCGGT TTCGCAAACA ATCGCGCGTA CAGCGTCGGC GCGTCGTACA GCTACATGGG CTTCAACGTC GCGGCCGCGT ACATGCAGCT CAACAACAAC ATCAACGCGC TGGCGCTCGC GGCCAGCGAC CCCGGCGCGG TGGCCGGCGA CTGGACCTTC GCGGCCAGCC GGCAGCGCAC GTGGGGCGCA GGCCTGAACT ACACGTTCGG GCCCGCGACG GCCGGCTTCG TGTTCACGCA GACACGCCTG ACCAATTCGG CCGGGATCAG CGCCGGGCAA TCCGGCGTGT CGACCGGCAT CCCGCTCGCC GGCGGCACGC GCTTCAACAA TTACGAGGTG AACGGCCGCT ACGCGCTGAC GCCGGCGTTC TCGCTCGCCG GCTCGTACAC GTACACCGAC AGCCGCCTCG ACGGCCAGAC GCCGAGCTGG CATCAGTTCA ACCTGCAGGC CGACTATGCG CTGTCGAAGC GCACCGACCT GTACCTGCAG AGCGAATACC AGCGGGTCAA TGCCAATGGG CTCGCGATCG GCGCGAACAT CAACGGACTC GGCGCCGCAT CGTCGACGAA CAAGCAGATC GCCGTCACGG CCGGCATGCG CCACCGCTTC TGA
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Protein sequence | MKKTLIVAAL AGVAASAAHA QSSVTLYGLI DAGITYTNNQ HGHSAWQETS GSINGSRWGL RGTEDLGGGL KAIFTLENGF GINNGSLKQN GREFGRQAFV GLAHESYGSL TLGRQYDSVV DYLGPLSLTG TQYGGTQFAH PFDNDNLNNS FRINNSVKYQ SANYGGLKFG GLYGFSNSTG FANNRAYSVG ASYSYMGFNV AAAYMQLNNN INALALAASD PGAVAGDWTF AASRQRTWGA GLNYTFGPAT AGFVFTQTRL TNSAGISAGQ SGVSTGIPLA GGTRFNNYEV NGRYALTPAF SLAGSYTYTD SRLDGQTPSW HQFNLQADYA LSKRTDLYLQ SEYQRVNANG LAIGANINGL GAASSTNKQI AVTAGMRHRF
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