Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_0867 |
Symbol | |
ID | 6178496 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | - |
Start bp | 954660 |
End bp | 955874 |
Gene Length | 1215 bp |
Protein Length | 404 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641680613 |
Product | coproporphyrinogen III oxidase |
Protein accession | YP_001807574 |
Protein GI | 172059922 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
TIGRFAM ID | [TIGR00539] putative oxygen-independent coproporphyrinogen III oxidase |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCAGG CGGCGGAAAC CGGCGCGCGC GTCGTCGCGA CGTTCACGTC GCCCGGGCAG GTGCGGCTCA CGTCGCTGCC GCCGCTCGCG CTGTACGTGC ATTTTCCGTG GTGCGTGCGC AAGTGCCCGT ACTGCGATTT CAACTCGCAC GAGTGGAAAG GCGAGCGCTT TCCGGAAACC GAATATCTCG ACGCGCTGCG TGCCGATCTC GAGCAGGCGC TGCCGCTCGT CTGGGGCCGG CAGGTGCATA CGGTGTTCAT CGGCGGCGGC ACGCCGAGCC TGCTGTCCGC GGGCGGGCTC GACCGGCTGC TGTCCGACGT GCGGGCGCTG CTGCCGCTCG ATGCGGACGC CGAGATCACG CTCGAGGCGA ATCCGGGCAC GTTCGAGGCC GCGAAGTTCG CGCAGTTTCG CGCGAGCGGC GTGAACCGCC TGTCGGTCGG CATCCAGAGC TTCAACGAAG GCCATCTGAA AGCGCTCGGC CGCATTCACG ACACCGCGCA GGCACGCGCG GCCGTCGAGA TCGCCGCGAA GACGTTCGAC AACTTCAACC TCGACCTGAT GTTCGCGCTG CCGAACCAGA CGCTCGACGA ATGCCGGACC GACATCGAGA CCGCGCTGTC GTTCGCGCCG CCGCATCTGT CGCTGTATCA CCTGACGCTC GAGCCGAACA CGATGTTCGC GAAGTTTCCG CCCGCGGTGC CCGACGACGA CGCGTCGGCC GACATGCAGG AGTGGATTCA CGAACGCACG GCCGAGGCCG GTTACGGACG CTACGAAGTG TCCGCGTATG CGAAGCCGGA TCATCAGTGC AAGCACAACC TGAACTACTG GCGCTTCGGC GACTATCTCG GGATCGGCGC GGGCGCGCAC ACGAAGCTGT CGTTCCCGAA CCGGATCCTG CGGCAGGCGC GCTACAAGCA TCCGGCGACC TTCATCGAAC AGGCGACGGC CGGCACGCCG GTGCAGGAAG AACGTGAAGT CGGCCCGCGC GACCTGCCGT TCGAGTTCAT GCTGAACACG CTGCGGCTCG TCGAGGGTTT CCCCGTGCAC AGCTTCGTCG AACGCACCGG CCTGCCGATC AGCACGATCG AGCCGGCACT CAAGGAAGCG GAGCGGCGCG GGCTGATCAC GCGCGATTTC GCGCAGATCG CGCCGACGCC GCTCGGCCAG CGTTTCCTCA ACGACCTGCA GGAATTGTTC CTGCGCGACG GCTGA
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Protein sequence | MSQAAETGAR VVATFTSPGQ VRLTSLPPLA LYVHFPWCVR KCPYCDFNSH EWKGERFPET EYLDALRADL EQALPLVWGR QVHTVFIGGG TPSLLSAGGL DRLLSDVRAL LPLDADAEIT LEANPGTFEA AKFAQFRASG VNRLSVGIQS FNEGHLKALG RIHDTAQARA AVEIAAKTFD NFNLDLMFAL PNQTLDECRT DIETALSFAP PHLSLYHLTL EPNTMFAKFP PAVPDDDASA DMQEWIHERT AEAGYGRYEV SAYAKPDHQC KHNLNYWRFG DYLGIGAGAH TKLSFPNRIL RQARYKHPAT FIEQATAGTP VQEEREVGPR DLPFEFMLNT LRLVEGFPVH SFVERTGLPI STIEPALKEA ERRGLITRDF AQIAPTPLGQ RFLNDLQELF LRDG
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