Gene BamMC406_0825 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_0825 
SymbolnusB 
ID6178529 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp914407 
End bp914844 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content67% 
IMG OID641680571 
Producttranscription antitermination protein NusB 
Protein accessionYP_001807534 
Protein GI172059882 
COG category[K] Transcription 
COG ID[COG0781] Transcription termination factor 
TIGRFAM ID[TIGR01951] transcription antitermination factor NusB 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.61519 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAGA GCGCCCGCCG ACAATCGCGC GAGCTGGCGA CGCAGGGCCT GTATCAGTGG 
CTGCTGTCGA ACGCGGCCCC CGGCGAGATC GACGCGCAAC TGCGCGGCGC GCTCGGTTAC
GACAAGGCCG ACAAGGAGCT GCTCGACGCC ATCCTGCACG GCGTGATTCG CGAGCATGCG
ACGCTCATCG AAGCCCTTAC GCCGTCGCTC GACCGCCCGG TCGACCAGCT GTCGCCGGTC
GAACGCGCCG TGCTGCTGAT CGCGACGTTC GAGCTCACGC ATCATGTCGA AACGCCGTAC
CGCGTGATCA TCAACGAAGC GGTCGAACTC GCGAAGACAT TCGGCGGCTC GGACGGCTAC
AAGTACGTCA ACGGCGTGCT CGACAAGCTC GCCGCGAAGC TGCGCCCCGC CGAAACGCAG
GCGCGCCGCA ACGGCTGA
 
Protein sequence
MKKSARRQSR ELATQGLYQW LLSNAAPGEI DAQLRGALGY DKADKELLDA ILHGVIREHA 
TLIEALTPSL DRPVDQLSPV ERAVLLIATF ELTHHVETPY RVIINEAVEL AKTFGGSDGY
KYVNGVLDKL AAKLRPAETQ ARRNG