| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0805 |
|---|
| Symbol | |
|---|
| ID | 6178978 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010551 |
|---|
| Strand | + |
|---|
| Start bp | 897321 |
|---|
| End bp | 898151 |
|---|
| Gene Length | 831 bp |
|---|
| Protein Length | 276 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641680553 |
|---|
| Product | undecaprenyl pyrophosphate phosphatase |
|---|
| Protein accession | YP_001807517 |
|---|
| Protein GI | 172059865 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1968] Uncharacterized bacitracin resistance protein |
|---|
| TIGRFAM ID | [TIGR00753] undecaprenyl-diphosphatase UppP |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.838445 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACTGGA TCCTGATCTG CAAGGCATTG ATCCTCGGCG TCGTCGAGGG GCTGACGGAA
TTCCTCCCGG TGTCGAGCAC CGGCCACCTG ATCGTCGCGG GCAGCTTCCT GAATTTCAAC
GATGCGCACG CGAAGACCTT CGACGTCGTG ATCCAGTTCG GCGCGATCCT CGCGGTTTGC
TGGGAATACC GGCAACGGAT CGTGTCCATC GTGACCGGTC TGCCGAGCCG GCCCGACGCG
CAGCGCTTCA CGCTCAACGT CGTGATCGCG ACGATTCCCG CGATCGCGCT CGGCCTGCTG
TTCGAGAAGA AGATCAAGGC CGTGCTGTTC TCGCCGGTGC CGGTCGCATT CGCGCTCGTG
GTCGGCGGCG CGATCATCCT GTGGGCCGAG GCGCGGCAGC GCGAACGCAG CGAGCCGCCG
CGCGTGCAGT CGATCGATGC GCTCACGCCG CTCGACGCGT TGAAGGTCGG CATCGCGCAA
TGTTTCGCGC TGGTGCCGGG CATGTCGCGC TCGGGCTCGA CGATCATCGG CGGGATGCTG
TTCGGCCTCG ACCGGCGCGT CGCGACCGAA TTCTCGTTCT TCCTCGCGAT TCCGATCATC
TTCGGCGCGA CGCTCTATGA AACGGTCAAG GACTGGCAGG CGTTCACCGT CGACTCGCTC
GGCCTGTTCG CGCTCGGGCT CGTTGCCGCG TTCGTCAGCG CGTTCGTGTG CGTGCGCTGG
CTGCTGCGCT TCGTCGCGAC GCACGACTTC ACCGTGTTCG CGTGGTACCG GATCGCGTTC
GGCCTGTTCG TGCTGCTCGT GGGTTACAGC GGGTGGCTGA ACTGGGCGTG A
|
|---|
| Protein sequence | MDWILICKAL ILGVVEGLTE FLPVSSTGHL IVAGSFLNFN DAHAKTFDVV IQFGAILAVC
WEYRQRIVSI VTGLPSRPDA QRFTLNVVIA TIPAIALGLL FEKKIKAVLF SPVPVAFALV
VGGAIILWAE ARQRERSEPP RVQSIDALTP LDALKVGIAQ CFALVPGMSR SGSTIIGGML
FGLDRRVATE FSFFLAIPII FGATLYETVK DWQAFTVDSL GLFALGLVAA FVSAFVCVRW
LLRFVATHDF TVFAWYRIAF GLFVLLVGYS GWLNWA
|
|---|
| |