Gene BamMC406_0788 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_0788 
Symbol 
ID6178355 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp882063 
End bp882743 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content71% 
IMG OID641680536 
Producturease accessory protein UreF 
Protein accessionYP_001807500 
Protein GI172059848 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0830] Urease accessory protein UreF 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCA CTGAGCTCGT CGCGCTGCTG CATCTCGCGT CGCCCGCGCT GCCGATCGGC 
GCGTTCAGCT ATTCGCAGGG ATTCGAAGCC GCGCTCGACG CGAACCTGAT CCGCGACGCC
GACACCGCGC GCGACTGGAT CGCGAGCGGG CTGACCGACG TGCTCGCGCA CGGCGAACTG
CCGTTCCTCG CGCACCAGCT CGCACGCTGG CACGCGCACG ACGCCGATGC GCTCGCGCGC
GAGAACGCAT GGTTCATCGC GAGCCGCGAA TCGGCGGAAC TGCGCCGCGA GACCGAGCAA
ATGGGCTGGT CGCTCGCGCA GCTCTGCACG TCGCTCGAAT GGGGCGATGC CGCGCGCCGC
GCGACGCTCG CGACGATTTC GCCGATCGCG CTGCCGACCG CGTTCACCTA TGCCGCTGCC
GCGCACGACG CGAGCGCCGA CGCCGTGCTC GCCGCGTACG CGTTCGGCTG GGTCGAGAAC
CAGACGTCGG CCGCGCTGAA AGCGGTGCCG CTCGGCCAGC TTGCCGGGCA ACGCATCATC
GTCGCGCTGC GCGGCGCGAT CGACGCGGCC GTGCGCCGCG CGCTCGCCAC GCCGCCCGAC
GCCGTCAACA CGTTCGCGCC GCAGCTCGGC ATCCTGTCAG CGCGGCACGA AACCCAGTAT
TCGCGGTTGT TCCGCTCCTG A
 
Protein sequence
MTTTELVALL HLASPALPIG AFSYSQGFEA ALDANLIRDA DTARDWIASG LTDVLAHGEL 
PFLAHQLARW HAHDADALAR ENAWFIASRE SAELRRETEQ MGWSLAQLCT SLEWGDAARR
ATLATISPIA LPTAFTYAAA AHDASADAVL AAYAFGWVEN QTSAALKAVP LGQLAGQRII
VALRGAIDAA VRRALATPPD AVNTFAPQLG ILSARHETQY SRLFRS